Gene Franean1_6342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6342 
Symbol 
ID5674660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7702031 
End bp7703155 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content70% 
IMG OID641245194 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001510589 
Protein GI158318081 
COG category[R] General function prediction only 
COG ID[COG4552] Predicted acetyltransferase involved in intracellular survival and related acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCCGG TGGTCGACGT TGTGCTGGAG CCCGGTCTTC GCTACACGGA GACGATCGAG 
TCGGGTGCGG GTAACCGGTC CATGCGTTAC TGCCGGCTCG TGGCAGACGA GGACACGCCC
GTCGGCGAGC TGGAGGTGCA TTCCTTCCGG TGGCGGTTCG GTGCCGTGGC CGTCGACGCC
GAGGGCATCG GCGGGGTCGA GGTCCAGCCC TCCTTCCGCC GGCGTGGCCA CATGAGCCGG
CTTCTCCGCC AGGCGCTGGA CGGCATGTCA CGGCGGGTGA ACGTCGCCAC GGTTTCCGAC
GGCATCCAGG GCGTGTACGA GAAGTTCGGC TTCGTCATGT CCGTTGCCGA GGGCCACCTG
GACATTCACG TTCGCGACAT CGAACGCGCC GCTGCCGCCG CCATGCTGGC CGCTGTACGC
GTCCGACCCG GCTCGGCCGA GGACCTACCG GCCATGGTGG ATCTCTACAA CTCGACGCAC
GCCCACCGGC CGTGGACGCA CGAACGCCCC GCGGACTGGA ACCGTCTGGT ACCCCAGACG
ACATGGCGAG CGGGCTCGGA GATCCTCGTC GTGGAGGCCG GGGGGACGCT CGCGGGATAC
GCGATCGTGG CGGGCCGGTC GTTCGGCGAT AGTTACTTCG GGCTGACTGT CCAGGAGATG
GCGGCCCGCG ACACGGGCAT TGCCCGGTGC CTGCTCGCCG ACATTGCCAG GTCCGCATGG
GAGTTGCGGG TCAGCGAGTT TCGGGTGCGG GAGCCGTTGG ACGGCGTCGT CGGGCGGCTC
GCGCGGCACC TGGGCTGTGG GTACAAGCAG GAGTTCCCGC CGACCGGCGG GATGATGGCC
GCGATCCTGA ACCGATCCGA GCTGCTGGCC ACGCTCGAAC CGGAACTTCG ACGCCGGGAC
CGCGATGCCG CCGACGCCGC GATGGACGAA CTGGCACGCG GCGAGCTCAT CCCCGACAAC
GGGCTCCTGG TCCGCCTGCT CCTCGGATAC TCCTCGGCCG CTGACGCGTC GACACCTGCG
GCGACCATCC CAGCACGCCA CCGGCGAACA TGCTCGGCGT GGTTTCCGGG CGGCAGCACC
GCGACGCTGC CGATGCCCTA CGCGCACGCG CTGGACCGGT ACTGA
 
Protein sequence
MDPVVDVVLE PGLRYTETIE SGAGNRSMRY CRLVADEDTP VGELEVHSFR WRFGAVAVDA 
EGIGGVEVQP SFRRRGHMSR LLRQALDGMS RRVNVATVSD GIQGVYEKFG FVMSVAEGHL
DIHVRDIERA AAAAMLAAVR VRPGSAEDLP AMVDLYNSTH AHRPWTHERP ADWNRLVPQT
TWRAGSEILV VEAGGTLAGY AIVAGRSFGD SYFGLTVQEM AARDTGIARC LLADIARSAW
ELRVSEFRVR EPLDGVVGRL ARHLGCGYKQ EFPPTGGMMA AILNRSELLA TLEPELRRRD
RDAADAAMDE LARGELIPDN GLLVRLLLGY SSAADASTPA ATIPARHRRT CSAWFPGGST
ATLPMPYAHA LDRY