| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6280 |
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| Symbol | |
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| ID | 5674599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 7627254 |
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| End bp | 7628261 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641245132 |
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| Product | integrase family protein |
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| Protein accession | YP_001510528 |
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| Protein GI | 158318020 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.737923 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACC CTGCCGGAAC CCTCGCCCCG GTTCCGTCCG TTGACCTCGA CATCGTCGGT
GCCCGGGACG CGAGCGTCTC CGCGACCACC GCCCGCATGA TCGACGACGC GACCGCAGCG
AACACCAAGC GCGCGTACGC CAGACAGTGG TCGACCTTCA CGGCCTGGTG TTCCCAGGAG
GGCCGGACCA TGCTCCCGTG CTCGGATGCC ACGCTCGCCG AGTACGCGGC GCAGCTCGTC
ACCGCCGGGG CCGGGCCGGC CACCGTGGAA CAGGCCATTG CCACCATCCG CCGGGTCCAC
CGCGACCAGG CCGCCACCCC GCCCGACACC CGCGCCGCAC GGCTAGTGCT GCGCACAGCC
CGCCGGGAAC GCGCCGACGC CGGGCAGGCC ACCCGACAGG CACCGCCAGC CGCGCTGGAT
CAGCTCCGCG CCATGCTCGC CGCCTGCGAC ACCAGCACCC GCGGAGTCCG TGACCGGGCC
CTGCTGCTGC TCGGCTTCGC GATGATGGGC CGCCGTTCGG AGCTCGCCGC GCTCGACCTG
GCCGACATCC GCGAGGTCGA CGAGGGCCTG ATCGTCGTCG TCCGCCGGTC GAAGACCGAC
CAAGACGGCC GCGGCGCCGA GGTCGCCGTT CCCTACGGCA GCCGGCCGGA CTCGTGCCCT
GTGCGCGCGG TCCGGGCCTG GCGCGGCTGG CTCGCCTCCA TCGGCATCAC CGAGGGCCGA
CTGTTCCGTT CCGTAACGAG GCACGGCCAC ATCGGCGAGG CCATGTCCGG CGACGGGATC
CGCCGAGCCG TCCGCGCCGC CGCCGTCCGG GCCGGCCTCC CGAACGCGGA CGTCTTCTCG
GCTCACTCGC TGCGGGCTGG AGGGGCGACA GCCGCGGCGA AGGCCGGCGC CCCGGTCGCC
GCGATCGCCC GGCAAGGCCG CTGGTCACCC ACCTCGCCCG TGGTGCACTC GTACATCCGG
GCAGCCGACC GATGGCGGGA CAACCCGATG GCCAGTGTGG GCCTGTGA
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| Protein sequence | MIDPAGTLAP VPSVDLDIVG ARDASVSATT ARMIDDATAA NTKRAYARQW STFTAWCSQE
GRTMLPCSDA TLAEYAAQLV TAGAGPATVE QAIATIRRVH RDQAATPPDT RAARLVLRTA
RRERADAGQA TRQAPPAALD QLRAMLAACD TSTRGVRDRA LLLLGFAMMG RRSELAALDL
ADIREVDEGL IVVVRRSKTD QDGRGAEVAV PYGSRPDSCP VRAVRAWRGW LASIGITEGR
LFRSVTRHGH IGEAMSGDGI RRAVRAAAVR AGLPNADVFS AHSLRAGGAT AAAKAGAPVA
AIARQGRWSP TSPVVHSYIR AADRWRDNPM ASVGL
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