| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6259 |
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| Symbol | |
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| ID | 5674578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 7601591 |
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| End bp | 7602847 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641245111 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001510507 |
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| Protein GI | 158317999 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.424921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.484535 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCACCG ACGACGTGGC CGCCGCGGTC CTCGACTCGT TACCGTCACG CATCGCCGTA
CTGGGACCAG ATGGAATGGT GGTGCGGCTC AACGACGCGT GGCGGCGCAG CGCCGCGGCC
GGGCTGGCGG TCGTCCCCGT CCGCCCCGGG GCGAGCTGGC TGGCCGCCTG CGAGGCAGCC
GGGCGGAGCA CGGAACCGCT GCGGACACTG GCCGGGCTGA CCCGCCGGAT GCTGGACAAC
CGCCGCGACC AGGTCCGCGT CGAGATCCCG CTGGCCACCC CGCGCGGCGA GCGCTGGCTG
GACGTCCGGA TCAGGGCGCT CAGCCGCGGC GACGGGCTGG TCGTCGTGGT GGACGACGTC
ACCGATCGCC ACGACCGGGA GGCCGTGCTG CGCCACCGGG CGACCCACGA CCCGGTGACG
GGGCTCCCGA ACCGCTCGGC TCTCCGTGAT CTGATCGCCG AGGCGCTGGC CGCGCCGCCG
ACCGTCGGTT CCGGCCAGAT GGCACCCCCC GGGGTAACCA GGAACAGCGG CCGGCGAACA
TCATCCGAAC GGGCGGGCGT CGCCGGCTTC GAGGCGTGGA CGGTACCCGT TCGGACCGGT
CGGCCAGACC CGGCGGAGCC GCCGACGGCC GATCGCACCG CGGGGGTCGA GGGAAATGAA
GCCGAAGCGA CCCCTCTCGG GGCCGGGGCC GCGGGGGTGG AGGCCGAGGG CACCGGGGGC
ACCGGGGGCA CGGCCGAGGG CACCGGAGTT GCGGTCCTTT TCCTCGATCT CGACGCCTTC
GGGCGCGTCA ACCAGCGGTT CGGCTACGCG GTCGGCGACG GGACGCTGCG CGCGGTCGCG
CTCCGGTTCG CCGAGGTGCT CGGGCCCGGC GCGGTGCTGG GTCGCTGGGG CGGGGACGAG
TTCGTCGTCG TGACGACCGA GGTGACCGGC CATGCGGCGG TGGCACTGGC CGACCGGCTG
ACCTCCTGCC TCGTCGACCC ACTGGTCGTG GACGACCACC GGGTCCGGGT AACGGCCAGC
GTCGGGATCG CGTTCGGTGG AGGGCTCCGA TCGGGTCATG GCGAGGTCGC GCCGCTCGGC
GCCGACCACG CCGCGGGCCT CGGCACCCCA CCGGCCCCGG TTCACCGGCC GCTGGACGGC
GATGCGCTGG TGAGGATGGC CGGCGAGGAG ATCGTGAAGG CGCGCTCCCG GGCCCGCGAG
ACCCGTCGCG GCCGCAGCCG CCGCCAGAAT CGCTCGAAAT CAGGCGACTC TTCTTAA
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| Protein sequence | MITDDVAAAV LDSLPSRIAV LGPDGMVVRL NDAWRRSAAA GLAVVPVRPG ASWLAACEAA
GRSTEPLRTL AGLTRRMLDN RRDQVRVEIP LATPRGERWL DVRIRALSRG DGLVVVVDDV
TDRHDREAVL RHRATHDPVT GLPNRSALRD LIAEALAAPP TVGSGQMAPP GVTRNSGRRT
SSERAGVAGF EAWTVPVRTG RPDPAEPPTA DRTAGVEGNE AEATPLGAGA AGVEAEGTGG
TGGTAEGTGV AVLFLDLDAF GRVNQRFGYA VGDGTLRAVA LRFAEVLGPG AVLGRWGGDE
FVVVTTEVTG HAAVALADRL TSCLVDPLVV DDHRVRVTAS VGIAFGGGLR SGHGEVAPLG
ADHAAGLGTP PAPVHRPLDG DALVRMAGEE IVKARSRARE TRRGRSRRQN RSKSGDSS
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