Gene Franean1_6258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6258 
Symbol 
ID5674577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7600429 
End bp7601226 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content71% 
IMG OID641245110 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001510506 
Protein GI158317998 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.434452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.442264 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATG ACCTGGGAGC GGCGGGCCTG CGTTTCGAGC GCGACGGAGC CATCGGCTGG 
TGTGTGATCG ACCGGCCGGC CGCCCGGAAC GCCCTGACAC CAGCGATGTA CTTCGGCATC
AAGCGGGCCG TGCAACTGGT CAACACCTCG CCCGACCTGG CCGCACTGAT CATCACCGGC
ACCGGTGACG TGTTCGCCCC CGGCGGCGAC CTCGGCAGCA GGTCCGAGCC CGGCGACAAC
CTGCCGCCCG ACCTGCGCGG CGAGGACGTC CTGCCGTTCC TCACCATCCG GGACAGCCGG
GCGCCGGTGG TGGCCGCCGT CAACGGCATC TGCCAGGCCG GTGGCCTGCT GATCGCCATG
ATGGCGGACA TCGCGGTCGC CAGCGACCAG GCGACGTTCC GGGTCCCCGA GCTGCTGCGG
GGCATCCCCG ACGCCACCTA TGCGGCCGTT CTGCCCGCCC ACGTCGGCAT CGCGGTGGCC
CGTGACCTGC TGTTGTCGGC GCGCCGCTTC GACGCCGCCG AGGCCCAGCG GCTGGGCGTG
ATCAGCCGAG TCGTGCCGCA CGACCAGCTC CGCGAGGCCG CCGTCCAGGC CGCCGGGGAG
ATTCTGCAGA CCGCCCCGGC GGCCCGCATG CATGTCAAGC GCATGCTGAA CGAGCGCTAT
GGGCTCATCG ACTACCAGAC CATGTTCTGG GCGATGCAGC AGTCGCCCGA GCCACGTGAG
GGCATGCGCG CGTTCATGGA GAAGCGGGCG CCTGAATGGG TCCCCGAGCA GTTCGCCGGC
GACGGCGGGC GGCGCTGA
 
Protein sequence
MTDDLGAAGL RFERDGAIGW CVIDRPAARN ALTPAMYFGI KRAVQLVNTS PDLAALIITG 
TGDVFAPGGD LGSRSEPGDN LPPDLRGEDV LPFLTIRDSR APVVAAVNGI CQAGGLLIAM
MADIAVASDQ ATFRVPELLR GIPDATYAAV LPAHVGIAVA RDLLLSARRF DAAEAQRLGV
ISRVVPHDQL REAAVQAAGE ILQTAPAARM HVKRMLNERY GLIDYQTMFW AMQQSPEPRE
GMRAFMEKRA PEWVPEQFAG DGGRR