Gene Franean1_6190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6190 
Symbol 
ID5674511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7522055 
End bp7522528 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content66% 
IMG OID641245042 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_001510440 
Protein GI158317932 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0428099 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACGC CCGCGATCGG TCAGCCGGCG CCCGACTTCA CGCTGCCCGG CCTGACGCTG 
ACCGGTGAGG AGGCCACCCG GTCCGAGTTC ACCCTCTCCG GGGAGCGGGG CCACCCGGTC
GTCCTCGCCT TCTACCCGGG TGACAACACT CCGGTCTGCA CGAAGCAGAT GTGTTCCTAC
GCCGCCGGCA TCGAGGTGTT CCGTGACCTC GGGGCCCTGG TCTGGGGAAT CAGCCCGCAG
GACCTCGACA GCCACGAAGC CTTCGCCCGT TCGTATTCTC TCAGCTTTCC CCTGCTCGCG
GACGACGACC GCACGGTCGT CAAGCAGTAT GGCATCTCCC TGCCAGGACT CGGACTACGC
CGGTCGGTGT TCCTCGTGGA TGCGAACGGC ATACTACGCT GGAAGCAGGT CGGGCTGATC
GGTGTGACCT ACTCCGACGT GGAGACGATC GCCAAGCAGC TCGCTCAGCT CTGA
 
Protein sequence
MATPAIGQPA PDFTLPGLTL TGEEATRSEF TLSGERGHPV VLAFYPGDNT PVCTKQMCSY 
AAGIEVFRDL GALVWGISPQ DLDSHEAFAR SYSLSFPLLA DDDRTVVKQY GISLPGLGLR
RSVFLVDANG ILRWKQVGLI GVTYSDVETI AKQLAQL