| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6172 |
|---|
| Symbol | |
|---|
| ID | 5674493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 7502331 |
|---|
| End bp | 7503098 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641245024 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001510422 |
|---|
| Protein GI | 158317914 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.16698 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCCG GTGGCCGGCG CGGCCTGCGC ATCTTCCTGA TCACAATGGT CGTGGCTCTG
ATCGTCGTCG GGGTACTGGA CCGGGTCGCC GCACGCGTGG TCGCCGACCA GATCGCGACC
AGGGCCCAGA ACGCCGAGAA CCTGGCGCAA CGGCCAGATG TGTCCCTCGG CGGCTTCCCC
TTCCTCACCC AGGTCGTCGC CGGCCGGTAT CGCGACGTCC AGCTCGAGGT CCGCGGCTAC
GAGCAGGACG GCGCACGGAT CGATCGCGTC CACGCCGACC TGACAGGGGT GCGGCTCCCG
CTCTCCGACG TCCTGCGCGG CGCGGTCGAG CGGGTGCCCG TCGACCGGGT CGACGCCGAG
GTCGACCTGA CCTTCAACGA CCTGAACGCA TACCTGGCCA GTCAGAACTC GCAGTTGAAG
ATCAGCCCGG CCGGGCAGGG GATCCAGGTC GGCGGAACGG TCGATCTCCT CGGCACGGCC
TACCCCGTCT CCGGTACGGC CGATATCGGC GTCGCGCCGG ACGCTGTCAC CTTCACCCCG
CGCGACCTGG CCCCCGACCT GGCGGCGGTG ATCCCGCCTG GCCTGCTCGA CACCGTCCGC
TCACTGCTCA CGGTGCGGGT GCCGGTGACC GGGCTGCCGT TCAACATGAA GCTGCGGTCC
GCCACAGTGG GCGCCGACCG GCTGACGTTC GCCGCTGGTG GGGAGAACGT GCTGCTCGAC
GCCACCGTCG CCCCGACGGT CGCCCCCGCG GGCACACCCG GCCTCTGA
|
|---|
| Protein sequence | MSPGGRRGLR IFLITMVVAL IVVGVLDRVA ARVVADQIAT RAQNAENLAQ RPDVSLGGFP
FLTQVVAGRY RDVQLEVRGY EQDGARIDRV HADLTGVRLP LSDVLRGAVE RVPVDRVDAE
VDLTFNDLNA YLASQNSQLK ISPAGQGIQV GGTVDLLGTA YPVSGTADIG VAPDAVTFTP
RDLAPDLAAV IPPGLLDTVR SLLTVRVPVT GLPFNMKLRS ATVGADRLTF AAGGENVLLD
ATVAPTVAPA GTPGL
|
|---|
| |