Gene Franean1_6136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6136 
Symbol 
ID5674457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7465521 
End bp7466345 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content70% 
IMG OID641244988 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_001510386 
Protein GI158317878 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.722717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.634024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGCCG AGCTGCTCGC CTTCCTGCGG CGCCGCATCA CCGGGGACTA CACGGTGGAC 
GAGCATGGCT TCGACCCCGA CCTGACCGAG CACATCGTGG CGCCGCTGCT GCGCCCGATC
TACCGGAGCT ACTTCCGGGT CGAGACCCGG GGCCTGGAGA ACATCCCGGA CAAGGGCGGG
GCGCTCGTCG TCTCGAACCA CTCGGGGACG GTACCCCTCG ACGCGCTGAT GACCGCCCTG
GCGATTCTCG ACCACCACCC GGCCCACCGT CACCTGCGGA TGCTGGCCGC GGACCTGGTG
TTCGCCCTGC CGTTCCTCGC GCCGTTGGCC CGCAAGACCG GCAACACCCT CGCCTGCCAG
GCGGACGCCG AGCGTCTGCT GGGAGCGGGG CATCTGGTCG GGGTGTGGCC GGAGGGCTTC
AAGGGCATCG GCAAGCCGTT CAGCGACCGC TACAAGCTCC AGCGGTTCGG CCGCGGCGGG
TTCGTCTCCG CGGCGCTGCG CACCGGGGTG CCGATCGTCC CGTGCACGGT CGTGGGCGCC
GAGGAGATCT ACCCGATGGT CGGCAACGCC AGGACGCTGG CGCGGCTGCT GGGGCTGCCC
TACCTCCCGA TCACGCCGAC CTTCCCCTGG CTGGGGCTGC TGGGGCTCAT CCCGCTGCCG
AGCAAGTGGA TCATCGAGTT CGGTGAGCCG GTGGATACCA CCGAGTACAC GCAGGCCGCG
GCCGAGGACC CGATGCTCGT CTTTGAGCTC ACCGACCGCA TCCGCGAGAC GATCCAGCAC
ACGCTGTACG GCCTGCTGAT GCAGCGCCGC TCGGTGTTCT TCTGA
 
Protein sequence
MLAELLAFLR RRITGDYTVD EHGFDPDLTE HIVAPLLRPI YRSYFRVETR GLENIPDKGG 
ALVVSNHSGT VPLDALMTAL AILDHHPAHR HLRMLAADLV FALPFLAPLA RKTGNTLACQ
ADAERLLGAG HLVGVWPEGF KGIGKPFSDR YKLQRFGRGG FVSAALRTGV PIVPCTVVGA
EEIYPMVGNA RTLARLLGLP YLPITPTFPW LGLLGLIPLP SKWIIEFGEP VDTTEYTQAA
AEDPMLVFEL TDRIRETIQH TLYGLLMQRR SVFF