| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6129 |
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| Symbol | |
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| ID | 5674450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7457150 |
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| End bp | 7458964 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641244981 |
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| Product | uroporphyrinogen III synthase HEM4 |
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| Protein accession | YP_001510379 |
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| Protein GI | 158317871 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1587] Uroporphyrinogen-III synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.143048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.442264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCC GACGTACCAA GAAGCCCGTG TCCCCGGTCG CGCTTGTGGG CGCCGGTCCC
CGTGATCCGG GGCTGCTCAC GGTCCTCGCC GTGGAGACTC TCACCGCTGC CGACGTGGTG
GTCGCCGACC CGGACGTACC GTCCGAGGTG GTCGAGTCGC TGTCGGCCGA GGTGCTGCGG
ATCGGTGACC TCGACGCCCC GAAGCCGGTG CGGGACGCGG AGGCCGCGAC CGCCGCGGTC
GTCAGCCGGG CACGGGCCGG GGACAAGGTC GTCCGGCTCT ACGCCTCGGA CCCGTGGCTG
ACCCGGATCG GCGCGGCGGA CGCGCAGTCG CTGGCCAAGG CCAAGATCCC CTACCGGGTG
GTTCCCGGTA TCTCGACCTC CGCCGCGGTC GCGACCTACG CCGGTGTCGC GCCGGGCAGC
CCGGTCACCT TCGCCAGCAC GTCGGGTGTC TTCTCGTCCT CGGGCTCGGT CGCCTCGGCC
TCACCGTTCG GCGTCGGTGA CCCGGTCGGC CCGCTCACCC CGCCCCCCTT CGGGACGTCC
CGCCTCGGCG GCCGGTCGAT GCCGAGCCTC GGCGGCGGCC CGCTGGGCGT GGGCGGCGGC
TTCGGCGCGC CCCTCGGCCT GGGCACCCCT ACCGGCTTCG GTGGTCTCGG CGTGCCCACC
ACGCCGGGCG ACGTCGACTG GGGCGCGCTC GCGCAGGCCC CCGGCACGCT GATCGTCACC
GCCGGCCCCA CCGAGATCGG CAAGGTGGCG ACCGCGCTGG TCGAGCACGG CCGCGCCGGT
GACACCCCCG TCGCGGTCAC CGTCGACGGC ACGACCACCG ACCAGCGCAC CGTCACCTCG
ACCCTCGACC GGATCGAGGC CGACGTCGCG CCGATGCTCA ACGCCACCGC GAACCCGCCG
AACGAGGTCA TCATCTCCGT CGGCCCGGTC GTCGCGACCC GGGCGAAGCT GTCCTGGTGG
GAGACCCGCG CCCTGTTCGG CTGGACGGTG CTGGTGCCCC GGACGAAGGA ACAGGCGGCG
ATCCTCTCCG ACTCGCTGCG CGCCCACGGG GCGAGTCCGC TGGAGGTGCC GACGATCGCC
GTCGAGCCGC CGCGGACGGC CGCGCCGATG GAGCGCGCCA TCACCGGGCT GGTCTCCGGC
CGCTACCAGT GGGTCGCCTT CACCTCGGTG AACGCCGTCA AGGCGGTGCA GGAGAAGGTC
GAGGAGCGCA GCCTGGACGC CCGCGCCTTC GCCGGTGTCA AGGTCGCCGC GATCGGCGAG
GCCACCGCGG ACGCGCTGCG CGCCTTCGGT ATCCGCCCCG ACCTGGTGCC CGCCGGCCAG
CAGTCCAGCG AGGGCCTGCT CGAGGACTGG CCCGAGTTCG ACGAGTCGCT TGACCTGCTC
GACCGGGTTC TCCTGCCGCG CGCCGACATC GCCACCGACA CTCTCGTCGC CGGCGTCAAG
GACCGCGGCT GGCAGGTGGA CGACGTCACC GCCTACCGGA CGGTGCGCGC CGCGCCGCCG
CCCGCGCCGA TCCGCGAGGC CCTCAAGGGC GGCCGGGTCG ACGCGGTGGT CTTCACCTCC
TCCTCCACGG TGCGCAACCT GGTCGGAATC GCCGGCAAGC CGCACGAGAC CACCGTCATC
GCGGTGATCG GCCCGGCGAC GGCCGCGACC GCCCAGGAGC TCGGCCTGCG GGTGGACGTC
CAGGCGACCG AGGCGTCGAT CCCGTCGCTC GTCGCGTCGC TGGCGGAGTT CGCCGCCGAG
CACCGCGAGG AGCTCGGCAA GGTCGGCCCG CTCGCCGCCA GGCTGCCCAA GCCGCGCCGG
GGTTCCCGGC GATGA
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| Protein sequence | MATRRTKKPV SPVALVGAGP RDPGLLTVLA VETLTAADVV VADPDVPSEV VESLSAEVLR
IGDLDAPKPV RDAEAATAAV VSRARAGDKV VRLYASDPWL TRIGAADAQS LAKAKIPYRV
VPGISTSAAV ATYAGVAPGS PVTFASTSGV FSSSGSVASA SPFGVGDPVG PLTPPPFGTS
RLGGRSMPSL GGGPLGVGGG FGAPLGLGTP TGFGGLGVPT TPGDVDWGAL AQAPGTLIVT
AGPTEIGKVA TALVEHGRAG DTPVAVTVDG TTTDQRTVTS TLDRIEADVA PMLNATANPP
NEVIISVGPV VATRAKLSWW ETRALFGWTV LVPRTKEQAA ILSDSLRAHG ASPLEVPTIA
VEPPRTAAPM ERAITGLVSG RYQWVAFTSV NAVKAVQEKV EERSLDARAF AGVKVAAIGE
ATADALRAFG IRPDLVPAGQ QSSEGLLEDW PEFDESLDLL DRVLLPRADI ATDTLVAGVK
DRGWQVDDVT AYRTVRAAPP PAPIREALKG GRVDAVVFTS SSTVRNLVGI AGKPHETTVI
AVIGPATAAT AQELGLRVDV QATEASIPSL VASLAEFAAE HREELGKVGP LAARLPKPRR
GSRR
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