Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6108 |
Symbol | |
ID | 5674429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7436570 |
End bp | 7437439 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641244960 |
Product | hypothetical protein |
Protein accession | YP_001510358 |
Protein GI | 158317850 |
COG category | [R] General function prediction only |
COG ID | [COG1427] Predicted periplasmic solute-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.100919 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGGAGC GGCCGGAAGT GGCGGAGCGG CCGGGTCGGC CCAGGGTCGG CCACATCCAG TTTCTCAACT GCCTGCCGCT CTACTGGGGC CTGGTCCACT CCGGTGCGCT GCTCGACCTG GAGCTGACCA AGGACACCCC GGACCGCCTG AGCGACGCAC TGGTCGCCGG TGACCTCGAC ATCGGCCCGA TCAGCCTCGT CGAGTATCTC CGGCACGCCG GGGATCTCGC CGTCCTCCCG GATCTGGCCG TGGGCTCCGA CGGGCCGGTC CTGTCGGTCG TCGCCACCAG CGCGCTCCCG CTCAGCGAGG TCCGCACCGT CGCGCTGGGC TCGACGTCCC GGACGAGTGT GCTGCTCGCG CGCATGCTGT TCGAGCAGCG GTGGGGACTG CGCCCGCAGT ACGTGACCAT GCCGCCTGAC ATCCCGCTGA TGCTGCGCGA GGCCGACCTG GCCGTCACGA TCGGCGATGT GGCGCTGCGG GCGACCTACG ACGCGGAGCG GGCGGGCCCG GGCCATCCGC TGCGGGTGTT CGACCTCGCT CGCGAGTGGC GGGAGTGGAC CGGCCTGCCG ATGGTGTTCG CCCTCTGGGC AGCCCGGCGC TCGTTCGCCG CGGCCCATCC CGGCGTGGTC AAGGAGGTTC ACGAGGCCTT CCGGTCGAGC CTCGACGCGG CCCTGCTCGA AGTGGACGAG GTCGCCCGGC GCGCGGCGCG GTTCGAGGTG TTCGACCCCG CGACGCTGGC CCGCTACTTC ACGACGCTCG ACTTCCGGCT GGGTGCCCGC CAGCAGGCCG GAATCCTGGA GTTCGCCCGC CGCGCGGCGG CCCGTGGCGA CGTGCCACCG CTCGGCGAGA TCGTTTTCGC GTCGGTGTGA
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Protein sequence | MAERPEVAER PGRPRVGHIQ FLNCLPLYWG LVHSGALLDL ELTKDTPDRL SDALVAGDLD IGPISLVEYL RHAGDLAVLP DLAVGSDGPV LSVVATSALP LSEVRTVALG STSRTSVLLA RMLFEQRWGL RPQYVTMPPD IPLMLREADL AVTIGDVALR ATYDAERAGP GHPLRVFDLA REWREWTGLP MVFALWAARR SFAAAHPGVV KEVHEAFRSS LDAALLEVDE VARRAARFEV FDPATLARYF TTLDFRLGAR QQAGILEFAR RAAARGDVPP LGEIVFASV
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