Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6052 |
Symbol | |
ID | 5674373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7363895 |
End bp | 7365991 |
Gene Length | 2097 bp |
Protein Length | 698 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641244900 |
Product | elongation factor G |
Protein accession | YP_001510302 |
Protein GI | 158317794 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0480] Translation elongation factors (GTPases) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00484] translation elongation factor EF-G |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.274772 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCTG ACGCACATGC CGCACTGGCC GCGACCCGGA ACATCGGGAT CATGGCCCAC ATCGACGCAG GCAAGACCAC GACCACCGAG CGCATCCTCT TCTACACCGG TGTGAACTAC AAGATCGGTG AAGTCCACGA GGGTGGCGCC ACGATGGACT GGATGGAGCA GGAGCAGGAG CGGGGGATCA CCATCACCTC CGCCGCCACC ACCTGCTCGT GGCGTGACCA CACCATCAAC ATCATCGACA CCCCGGGCCA CGTCGACTTC ACCGTCGAGG TGGAGCGGTC GCTGCGCGTC CTCGACGGGG CGGTCGCGGT GTTCGACGCC GTCGCCGGCG TCGAGCCGCA GAGCGAGACG GTGTGGAAGC AGGCCGACCG CTACGACGTC CCGCGGATCG CGTTCGTCAA CAAGATGGAC CGGGTCGGCG CCGAGTTCCA CCGCTGCGTC GACATGATGG TCGACCGGCT GGACGCGACG CCCGCCGTCA TCCAGCTTCC CTGGGGCGTC GAGGCGGACT TCCGCGGCGT GATCGATCTG ATCCGCATGA AGGGCCTGCT CTGGCACACC GAGGACAAGG GCGCCTCGTT CGAGACCGTC GACATCCCGA CCGACCACGC TGAGGCCGCG CAGGAATGGC GGGAGAAGCT GGTCGAGACC GTCGCCGAGA ACGACGACGA GCTCATGGAG CTCTACCTCG AGGGTGTCGA GCCCACCGAG GAGCAGCTCA TGGCGGCTCT GCGGCGGGCC ACGGTGGCCA GCAAGATCAA CCCGGTGCTC TGTGGTTCCG CGTTCAAGAA CAAGGGCGTG CAGCCCATGC TCGACGCGGT CGTGGACTTC CTCCCCTCGC CGACGGACAT CGGCTCGGTG ACCGGTCACT CGGTCGGCAA GGAGGACACC GAGGTCGTCC GCAGGGCCGA CGAGGACGAG CCGTTCTCGG CGCTGGCCTT CAAGATCATG TCGGACCCGT ACGTCGGCAA GCTGACCTAC ATCCGGGTGT ACTCCGGCAG GATCACCAGC GGTACCGCGG TGCTCAACTC GACCAAGGAC CGCAAGGAGC GCATCGGCCG CATCCTGCAG ATGCACGCCA ACCACCGGGA GGACCGGGAC GGCGTGGGCG CGGGTCAGAT CGTGGCCGTG GTGGGCCTGA AGAACACCAC CACCGGCGAC ACGCTGTGTG ACCCGAACTC GCCGGTCATC CTCGAGTCGA TGATCTTCCC TGCCCCGGTC ATCGACGTTG CCATCGAGCC GAAGACGAAG GCTGACCAGC AGAAGCTGGG CACCGCGATC CAGCGGCTCA CCGAAGAGGA CCCGACCTTC CAGGTCCGCA CCGACGAGGA GACCGGTCAG ACGGTCATCG CCGGTATGGG TGAGCTGCAC CTCGAGGTCT TCGTCGACCG GATGCGCCGC GAGTACGGCG TCGAGGCGAA CGTCGGCAAG CCGCAGGTGG CCTACCGCGA GACCATCCGC CGCAAGGTGG AGAAGGTCGA CTACACCCAC AAGAAGCAGA CGGGTGGGTC CGGGCAGTAC GCCCGTGTGA TCATCGACCT GGAGCCCTCC GGCGGCGACG GCGGCGGCTA CGAGTTCGAG AACAAGGTGA CCGGCGGACG CATCCCGCGG GAGTTCATCC CGTCGGTGGA CGCCGGCTGC CAGGAGGCCA TGGAGTTCGG CGTCCTGGCC GGTTACCCGC TCGTCGACGT CAAGGTCACG CTGCGGGACG GCCAGTTCCA CGAGGTCGAC TCCTCCGAGC TCGCCTTCAA GATCGCCGGT TCCATGGCCT TCAAGGACGC GGCCCGGAAG GCCGACCCGG TCATCCTCGA GCCGATGATG TCGGTCGAGG TCACGACGCC CGAGGACCAC ATGGGTGACG TGATCGGCGA CCTCAACTCG CGGCGTGGGC AGATCCAGGC CATGGACGAG CGGGGCGGTT CCCGGATCGT CAAGGCCCTG GTGCCGCTCT CGGAGATGTT CGGGTACGTC GGCGACCTGC GGTCGAAGAC CTCCGGGCGG GCGAGCTACT CGATGCAGTT CGACTCCTAC GCCGAAGTCC CGCAGAACGT CGCCAAGGAC ATCATCGCGA AGGCGAGGGG CGAGTAG
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Protein sequence | MAADAHAALA ATRNIGIMAH IDAGKTTTTE RILFYTGVNY KIGEVHEGGA TMDWMEQEQE RGITITSAAT TCSWRDHTIN IIDTPGHVDF TVEVERSLRV LDGAVAVFDA VAGVEPQSET VWKQADRYDV PRIAFVNKMD RVGAEFHRCV DMMVDRLDAT PAVIQLPWGV EADFRGVIDL IRMKGLLWHT EDKGASFETV DIPTDHAEAA QEWREKLVET VAENDDELME LYLEGVEPTE EQLMAALRRA TVASKINPVL CGSAFKNKGV QPMLDAVVDF LPSPTDIGSV TGHSVGKEDT EVVRRADEDE PFSALAFKIM SDPYVGKLTY IRVYSGRITS GTAVLNSTKD RKERIGRILQ MHANHREDRD GVGAGQIVAV VGLKNTTTGD TLCDPNSPVI LESMIFPAPV IDVAIEPKTK ADQQKLGTAI QRLTEEDPTF QVRTDEETGQ TVIAGMGELH LEVFVDRMRR EYGVEANVGK PQVAYRETIR RKVEKVDYTH KKQTGGSGQY ARVIIDLEPS GGDGGGYEFE NKVTGGRIPR EFIPSVDAGC QEAMEFGVLA GYPLVDVKVT LRDGQFHEVD SSELAFKIAG SMAFKDAARK ADPVILEPMM SVEVTTPEDH MGDVIGDLNS RRGQIQAMDE RGGSRIVKAL VPLSEMFGYV GDLRSKTSGR ASYSMQFDSY AEVPQNVAKD IIAKARGE
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