Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5998 |
Symbol | |
ID | 5674319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7315857 |
End bp | 7317650 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641244846 |
Product | inosine-5'-monophosphate dehydrogenase |
Protein accession | YP_001510248 |
Protein GI | 158317740 |
COG category | [F] Nucleotide transport and metabolism [R] General function prediction only |
COG ID | [COG0516] IMP dehydrogenase/GMP reductase [COG0517] FOG: CBS domain |
TIGRFAM ID | [TIGR01302] inosine-5'-monophosphate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.352263 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0532211 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCGGGCC TCTACGATGG AGTATCACCG TCGCCCGACC GGCGGGCCGC GCGGAGCCCA GCATGCTTCA CCCGCCTGCC CGGGCAGACC GGCTCGCGCC GGTTCCCGGG CGCGGGACTC CCCAGACATC GCGGGGACGC TCCCGCCGGC GCCGGGCCGA TGCGAACGGA AGGTGCCATG GACGGTTCCC CCGCCAACCC GACGACCTCG ATCACGCGCG CGACCGGGGA ACCCGACCTC GACCAGTCGC CCGTCCGGCA CGTCGCTGAC AGCCTGGGCG CCGAGGGGCC GGCGCTCCCG CCGAAGCTCG CGATGCTCGG CCTCACCTTC GACGACGTCC TGCTGCTGCC GGCGGCGTCC GAGGTGGCGC CGTCGGGCGT CGACACGACC ACGCGGCTGT CCCGCAACAT CTCGCTGGCG GTCCCGCTGG TGTCCTCCGC GATGGACACC GTGACCGAGG CCCGGATGGC GATCGCGATG GCCCGCCAGG GCGGCGTCGG CGTGCTGCAC CGCAACCTGT CCGTCGACGA CCAGGCACAG CAGGTCGACA TGGTGAAGCG GTCCGAGTCG GGGATGATCA CCTCCCCGAT CACCTGCGGG CCGGACGCCA CCATCGAAGA GGCGAACGTG CTCATGGCGC GTTACCGCAT CTCCGGCGTC CCGGTGACCG AGCCGGACGG CCGCCTCGTC GGGATCGTGA CCAACCGCGA CATCCGCTTC GAGCGGGACT ACACCCGCCG CGTCCACGAA GTGATGACCC GCATGCCGCT GATCACGGCA CCGGTCGGGG TCTCGGCGGA CGACGCGCTC GCTCTGCTGC GGCACAACAA GGTCGAGAAG CTGCCCATCG TCGACGGGCA CGACCGGCTG TGCGGACTGA TCACGGTCAA GGACTTCACC AAGCGCGAGC AGTACCCGCG GGCGACCAAG GACGCGGACG GCCGCCTCGT GGTCGGCGCC GCGGTCGGCG TCGGCGAGGA CGCGCTGAAG CGCGCCCAGG TCCTCGTCGC CGCCGGGGTG GACTTCCTCG TCGTCGACAC CGCGCACGGC CACCACCACG CCGTCCCCGA CATGATCGCC CGGATCAAGG CCGAGATGCC CGCCGGGGTG GACGGCCGTC CGCTCGACGT CATCGGTGGC AACATCGCCA CCGCGGCCGG GGCCGCCGCG CTCATCGCGG CCGGCGCCGA CGCCGTCAAG GTCGGGGTCG GGCCGGGCTC GATCTGCACG ACCCGGGTGG TCACCGGCGT GGGTGTTCCG CAGGTCACCG CGATCTACGA GGCGGCGCGG GCGGCGCGGG CCGCCGGCGT GCCGGTCATC GGCGACGGCG GGCTGCAGTA CTCCGGTGAC ATCGCCAAGG CGATTGCCGT CGGCGCGGAC ACCGTGATGC TCGGCAGCCT GCTCGCCGGT GTCGACGAGA GCCCCGGTGA GCTCATCTTC ATCAACGGCA AGCAGTACAA GTCCTACCGG GGGATGGGCT CGCTCGGCGC CATGCGCAGC CGCGGCGACA CCCGCTCCTA CTCCAAGGAC CGCTACTTCC AGGACGACGT CCTCTCCGAC GACAAGCTCG TCCCCCAGGG TGTCGAGGGC CAGGTGCCCT ACCGCGGCTC GCTGGCCGGG ATGGCCCACC AGCTGATCGG CGGCCTGCAG GCCGCGATGG GGTACACGGG TGCCGCGACC ATCCGTGATC TCCAGGAGAA CAGCCAGCTG GTGCGGATCA CGTCGGCTGG CCTGACCGAG AGCCACGCGC ACGACGTCCA GATGACGGTC GAGGCGCCGA ACTACACCCG GTGA
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Protein sequence | MPGLYDGVSP SPDRRAARSP ACFTRLPGQT GSRRFPGAGL PRHRGDAPAG AGPMRTEGAM DGSPANPTTS ITRATGEPDL DQSPVRHVAD SLGAEGPALP PKLAMLGLTF DDVLLLPAAS EVAPSGVDTT TRLSRNISLA VPLVSSAMDT VTEARMAIAM ARQGGVGVLH RNLSVDDQAQ QVDMVKRSES GMITSPITCG PDATIEEANV LMARYRISGV PVTEPDGRLV GIVTNRDIRF ERDYTRRVHE VMTRMPLITA PVGVSADDAL ALLRHNKVEK LPIVDGHDRL CGLITVKDFT KREQYPRATK DADGRLVVGA AVGVGEDALK RAQVLVAAGV DFLVVDTAHG HHHAVPDMIA RIKAEMPAGV DGRPLDVIGG NIATAAGAAA LIAAGADAVK VGVGPGSICT TRVVTGVGVP QVTAIYEAAR AARAAGVPVI GDGGLQYSGD IAKAIAVGAD TVMLGSLLAG VDESPGELIF INGKQYKSYR GMGSLGAMRS RGDTRSYSKD RYFQDDVLSD DKLVPQGVEG QVPYRGSLAG MAHQLIGGLQ AAMGYTGAAT IRDLQENSQL VRITSAGLTE SHAHDVQMTV EAPNYTR
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