Gene Franean1_5913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5913 
Symbol 
ID5674234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7183328 
End bp7184257 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content76% 
IMG OID641244761 
Productbiotin--acetyl-CoA-carboxylase ligase 
Protein accessionYP_001510163 
Protein GI158317655 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0340] Biotin-(acetyl-CoA carboxylase) ligase 
TIGRFAM ID[TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.831229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAGTGC ATCCCGCCGA ATCCCCCGGG CGGCGAACGG CCCCTGTCGA GCCGGCCATC 
TCGCCCCCTG TCGCAGGTCA CAGCCCAGCC CCGGCGGTGC CGCCAGGGGC ACGACGGCCG
CTGGACACCG ACACTCTCCG CCCGCTCGCC GCCCGCCTCG GGCTGGCGCT CGCCGTCGTC
GACGAGATCG ACTCGACCAA CGCCGAGCTC GGACGGATCG CCCGCGGCCT GCCCGGCGCG
GTGGGACTGC CCGCGGTCAC CCGCCCGCCC ACGGTTACGG ACGGTGCCCC GGCCGGGCTT
GTGCTCGCCG CCGAGCGGCA GACCGCGGGC CGCGGGCGGC TCGACCGCTC CTGGGAGTCA
GCGGCCGGCG CCGGGCTCAT GGTGTCCGTG CTGGTGCGCC CCGAGATCGA GCCCCGGTGG
CTCGGCTGGC TGCCGATGGT CGTCGGCACC TCGCTCGTAC GCACGCTGCG CAGGTACGCG
GGCGTGCCCG CGGTGCTGAA ATGGCCGAAC GACGTGCAGG TCGACGGGGC GAAGCTCGCC
GGCATTCTCG TGGAGCTGGC GCCGAGCCCT GCTGTGCCGC CGGCGGCCGT AATCGGGTTC
GGGCTGAACG TCACCGCCCG CGCCGCGGAG CTGCCGCCGC GCTCCACCAG CCTGCTGCTG
CTCGGCGCCG ACCCCGCCCG CCTGGACCGC TCCGCCCTGC TCGGCGCCCT GCTGACCGAC
CTCGTCGATG CGTTGGGCCG GTGGGAGGCG GCGCCCGAGC GGGCCCGCGG GGAGTACCGC
GACACGTGCG CCACGCTGGG CCGGCGGGTC CGCGTCGAGC TTCCGGACGG GACGTCCACG
CACGGCACGG CGACCGACGT CGACGAGCTC GGCCGGCTCA TCGTCGACGG GCAGGCGTTC
AGTGCCGCCG ACATCGTCCA TCTGCGCTGA
 
Protein sequence
MPVHPAESPG RRTAPVEPAI SPPVAGHSPA PAVPPGARRP LDTDTLRPLA ARLGLALAVV 
DEIDSTNAEL GRIARGLPGA VGLPAVTRPP TVTDGAPAGL VLAAERQTAG RGRLDRSWES
AAGAGLMVSV LVRPEIEPRW LGWLPMVVGT SLVRTLRRYA GVPAVLKWPN DVQVDGAKLA
GILVELAPSP AVPPAAVIGF GLNVTARAAE LPPRSTSLLL LGADPARLDR SALLGALLTD
LVDALGRWEA APERARGEYR DTCATLGRRV RVELPDGTST HGTATDVDEL GRLIVDGQAF
SAADIVHLR