| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5873 |
|---|
| Symbol | |
|---|
| ID | 5674196 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 7128302 |
|---|
| End bp | 7129561 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641244723 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001510125 |
|---|
| Protein GI | 158317617 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0436897 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.694772 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGGAA ACAGCGCACC CACGCCGAAC GGTGCCGAGC CCGACCCGTT CGCCGACCCG
TTCGCCGATC TGGTCCTTGA CGAGGCCTTC ATCGCCGGAG CCACCCGATA CGAGGCCCCG
GCCCGGACGA GAGCCGCGGT CGCCCGCTTC GGGCCGCTCG AAGACGGTTC AACGCCCTGG
CGCTCGTACG GCGGCGGCGG CCGGCCACGG CGGGCGGGAG GTGCCTCCGG ACCACGGCTG
GGCCGCGGAC GGGCGTCCCA GTCGATTCCG GAGATCTCGC CGCGGCCGCG GTCCCGGGGG
CGGATCGTGC TGGCACTGAT CAGCGTCGTG CTGCTCTCGA CCACCGTCTA CGGGTTCGTG
GCCTCGACCG TCGACAGTCC GCCGTCCACC ACGCTCTCGG CGGACCCGCC GACCCCGGCA
GGGAGTGCCT CCGGTCGCGA CGCCATCGCC GAGGAATCGC TACCGGATCT CTACCGGCGG
GACTGGACGG CCGGCCACTG CTACACCTGG CTCCAGCGGG ACGCCTCGAC CGCGGTCAAC
GACGTCCCCT GCGCCGGCCC GCACCTGTTC GAAGCGGTCG GGCCGCTCGA CATCGGCTCC
GCCTATCCTG AGGGGACGAC ATACCCGTCG CCCGCCGAGT GGGTGGCGCT CGGCAGGCGG
CAGTGCGAGC CGCTCATCAC CGCGTATCTC GGCTACGGGC TCGACCCGTT CGGGCGCTTC
GGCACGAGCG TCCTCCACTC CAAGGAAGCG GAGTGGAACA CCGGCGAGCG GGACATCGTC
TGCGGCCTGT CACTCCATCC CTCGCCCACG GCACCGTACG AGGTGCCCGA CCTCGAAGGA
CAGGTCCGCG GAGCCGACCA GGCGCTGACC TATCCCACCG GGACCTGCTT CCGTACGAAC
ACCGAGGGCC GCAACGAGGT GGTCCCCTGC GAGCAGAGCC ACCATTCGCA GAGCGTGGGC
ACGGCGACCC TGGCGGACAC CGCCGAGGGC GCACCGAGCA GTGCGCCCCT CTCGGCGGAG
CGGCTCGGCG AACTCATCGA CGCGGCCTGC GCACCCCGCA TCGCGCCCTA TCTCGACCGA
GGATTCGGGG GCGCATCCGT ACAGGGCGGA TCGCATTCCC TCCCCCCGGA AAGCTGGTGG
GCGGGAACCC GATCCACCAC CTGCACCGTG AGCCTCGTCG ACCGGAACGG CAGAAAACTG
GAGACGACCG GCCTACTCAG CCCGGACGAT GAATCGGGGT CGTTCAGCGC GAACGTGTGA
|
|---|
| Protein sequence | MSGNSAPTPN GAEPDPFADP FADLVLDEAF IAGATRYEAP ARTRAAVARF GPLEDGSTPW
RSYGGGGRPR RAGGASGPRL GRGRASQSIP EISPRPRSRG RIVLALISVV LLSTTVYGFV
ASTVDSPPST TLSADPPTPA GSASGRDAIA EESLPDLYRR DWTAGHCYTW LQRDASTAVN
DVPCAGPHLF EAVGPLDIGS AYPEGTTYPS PAEWVALGRR QCEPLITAYL GYGLDPFGRF
GTSVLHSKEA EWNTGERDIV CGLSLHPSPT APYEVPDLEG QVRGADQALT YPTGTCFRTN
TEGRNEVVPC EQSHHSQSVG TATLADTAEG APSSAPLSAE RLGELIDAAC APRIAPYLDR
GFGGASVQGG SHSLPPESWW AGTRSTTCTV SLVDRNGRKL ETTGLLSPDD ESGSFSANV
|
|---|
| |