Gene Franean1_5857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5857 
Symbol 
ID5674180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7106836 
End bp7107036 
Gene Length201 bp 
Protein Length66 aa 
Translation table11 
GC content70% 
IMG OID641244707 
Producthypothetical protein 
Protein accessionYP_001510109 
Protein GI158317601 
COG category[S] Function unknown 
COG ID[COG2835] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.768237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.140959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCG ACCCCCTGTT GCTGGAGATC CTCGCCTGCC CGTGCCCGGA GCATGCTCCG 
CTGCGGCAGG AGACGCTGGA CGGCGCTCCC GTGCTGGTCT GCGAGTCGTG CGGTCTGGCC
TTCCCGGTTC GCGACGACAT CCCGGTGATG CTGCTCGACG AGGCGAAGCC ATTCCCGGCC
GCGGCCGGAT CCTCGTCCTG A
 
Protein sequence
MSLDPLLLEI LACPCPEHAP LRQETLDGAP VLVCESCGLA FPVRDDIPVM LLDEAKPFPA 
AAGSSS