| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5807 |
|---|
| Symbol | |
|---|
| ID | 5674130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 7051395 |
|---|
| End bp | 7051769 |
|---|
| Gene Length | 375 bp |
|---|
| Protein Length | 124 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641244657 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001510059 |
|---|
| Protein GI | 158317551 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.981797 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGTCG TCGACGACCA GGAACCGTTC CGGGTCACGG CGGCCTCCGT GGCCGAGGCC
ACCGAGGGGT TCGAGCTGGT CGGGACCGTC GAGACCGCCG AGGAGTCGGT CGCCGCGGTC
GCCGCGCTCG CACCCGACCT GGTGCCGATG GACGTCAACC TGCCGGGCAT GGACGGCCTC
GCGGCGACCC GGCTGCTGCG GGTGTCCGGT GCGGTGAGTT CAGTGGTCCT GATGTCGTCG
TACGACGCCG ACCGCTACGC CGACGTGGCG ACCGAGTGCG GTGCCATCGG ATACCTGACG
AAGGTCGACC TCGACCCGGA CGGCCTGCAG GCGGTCTGGG ACCGAGGTCG ACGACGGCCC
GGGCCGTCGA CATAG
|
|---|
| Protein sequence | MIVVDDQEPF RVTAASVAEA TEGFELVGTV ETAEESVAAV AALAPDLVPM DVNLPGMDGL
AATRLLRVSG AVSSVVLMSS YDADRYADVA TECGAIGYLT KVDLDPDGLQ AVWDRGRRRP
GPST
|
|---|
| |