Gene Franean1_5795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5795 
Symbol 
ID5674118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7037575 
End bp7038159 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content77% 
IMG OID641244645 
Producthypothetical protein 
Protein accessionYP_001510047 
Protein GI158317539 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.890959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTTC CAGCCGGCGG CGTCCTGGTC GTCGCGGGCA TCCCGGGCGC GGGCAAGAGC 
ACACTGATCC AACGGCTGTA CCACGGTGCG CCCGCCCCCG CCCCCGGCCG CGGTGCCGGG
CCGGCGGGCG GCCGGGCGGA CGACCCGCTC GTGCTGGACT CCGCGCAGGT GCGGGCCGCG
CTGGCCCGGC GGCTCGGGCA CCTCCCGTAC GCGCTCTACC GGCCGGTCGT GCACACCGTC
CACTACTGGC GGATCGCGGC CTGGACGGCC GGGCCACGCC GCAACCTGGT GATCCACGAG
TGCGGCACCC GGACGTGGGC CCGGCGCACG GTGGCCGCCC TCGCACGGCT GCGCCGCCGT
CCCGCCCACC TGGTCTTCCT GGAGACCTCG CCGGCCGCGG CGCTGGCCGG GCAGCACGCA
CGCGGACGGG TCGTCCCCCA CCGGTCGTTC CGGCGGCACG AACGGTCGTG GGCCCGGATG
CGCGCCGCCC TGCAGGATGG GTCGCTGGCC CGGGAGGGCT GGACGTTCGC GCGCGGGATC
AGCCGCGAGG AGGCCGCCCG CCTGACCGAG ATCCGGTTCG AGTGA
 
Protein sequence
MIVPAGGVLV VAGIPGAGKS TLIQRLYHGA PAPAPGRGAG PAGGRADDPL VLDSAQVRAA 
LARRLGHLPY ALYRPVVHTV HYWRIAAWTA GPRRNLVIHE CGTRTWARRT VAALARLRRR
PAHLVFLETS PAAALAGQHA RGRVVPHRSF RRHERSWARM RAALQDGSLA REGWTFARGI
SREEAARLTE IRFE