Gene Franean1_5762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5762 
Symbol 
ID5674088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6999170 
End bp7000309 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content73% 
IMG OID641244615 
Productisobutylamine N-hydroxylase 
Protein accessionYP_001510018 
Protein GI158317510 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTTCTC TTGACGATGC CCGTGACACT TGCAACCGGT ATCATCCCGG GCTGCTGAAA 
GCCTTGGCGG ACATTCCCTT CGCCGAGCGG GAAAGCCCCG CCAGTACCGT CGTGGAACTT
TTTCGCAGTC ACGACGGGGC GGCCTTGCTG GTTCCCACCT CCTTCGGCGG CCAGGGAGTC
GACGCGGTCG AGGCGGTGCG GGTGCAACGC GCCCTGGGTT CGGTGTCGCC GTCGCTCGCG
GCGGCGGTGA CGATGCACCA TTTCACCGTT GCCATGCTGT TCGCGCTGGC CGCGGACGCC
GGCCGGCTCA GCGCCGCGCA ACTCGACGTA CTGCGCGGCG TGGCCGCCAA GCGCTGGCTG
CTGGCGTCCG GTTGGGCCGA AGGGCGCACC CACCAGAACA TCCTCGCGCC GGCGGTGGCG
GCCACGCCCG CCGACGGCGG CTACCGGCTG AGCGGCTCGA AGAAGCCGTG CAGCCTGTCC
CGCTCGATGG ACCTGCTCAC CGCCAGCATC GCGGTCCCGG CGGCCGACGG GACGCCGGAG
CTGGCCGTAG CGCTGGTCCC GGTGCCAGCG CCTGGCCTCA CGGTGCACGA GTTCTGGCGC
AACGAGGCGC TCGCGGCGGC CGAGAGCGAC GAGGTCCGGC TGGACGACGT GTTCGTGCCG
GCCGACCTGG TGGTCCGAAC CGCAGCCGAC GACCCAGGTC GGCTCGACGA CCTGCAGACC
GCCGGGTTCG TGTGGTTCGA GCTGCTGATC TCGGCCGGCT ACGCCGGTGC CGCCGCCGCG
CTGGTCGAGC GGGTCATCGA CGGCGAACGC GGCAGCCTGA CGGACCGCGC CTCGCTCGCC
GTCCGCGAAC AGGCCGCGTT CGCGCTGCTC GAGGGCACTG CCCGAGCGGT TCGCGACGGG
CTGGCGGGCG AGGCGGCCGT CGCCGCGGTC CTGGTCGCCC GGTACGCCGT GCAGGACGCG
CTCGTCGGGG CCGCGGACCT CGCGATGGAG CTGCTCGGCG GGATGGACTT CGTCCGCTCC
GACGAGAACT CCCGCTTGGC GAGCGCGGTG CGGCCGCTCG CCTTCCATCC GCCAGGCCGC
GGGTCCGCGG CGGGCCCGCT GCTGGCCTGG TTCGCCGGCG CCCCGCTGGA GCTGGCGTGA
 
Protein sequence
MRSLDDARDT CNRYHPGLLK ALADIPFAER ESPASTVVEL FRSHDGAALL VPTSFGGQGV 
DAVEAVRVQR ALGSVSPSLA AAVTMHHFTV AMLFALAADA GRLSAAQLDV LRGVAAKRWL
LASGWAEGRT HQNILAPAVA ATPADGGYRL SGSKKPCSLS RSMDLLTASI AVPAADGTPE
LAVALVPVPA PGLTVHEFWR NEALAAAESD EVRLDDVFVP ADLVVRTAAD DPGRLDDLQT
AGFVWFELLI SAGYAGAAAA LVERVIDGER GSLTDRASLA VREQAAFALL EGTARAVRDG
LAGEAAVAAV LVARYAVQDA LVGAADLAME LLGGMDFVRS DENSRLASAV RPLAFHPPGR
GSAAGPLLAW FAGAPLELA