Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5748 |
Symbol | |
ID | 5674074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 6985405 |
End bp | 6986238 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641244601 |
Product | transposase IS4 family protein |
Protein accession | YP_001510004 |
Protein GI | 158317496 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.970516 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTTCA CATACACCGC CGAGTTGCCC CTCGGCGATC ACACCGTCTT CCGCCTGGCG GGTCTTCTCG TCGCGGAGCG TCAGCGTCGC GGCACTCGCA ACGGCACCCG CACGCTGTCC ACGTTGGAAC AGGCGGTCAT GGTCCTGCGC TGGTTCTGTG ACGGCACCAG GACCAGCCGG CTCTTCAAGG ATCACGGGGT GTCCCGGTCG GTGGGCTACC GCTACCTGCA CGAGGGCATC GCCGTGCTTG CCTGGCAAGC CCCTGACCTG CGCGAAGCGC TGATGCGCGC CAGGATCGCC GGCTACGGCC ACCTCATCAT CGACGGTACG ATCATCGAGA CCGACCGGCT GCGCATGCCC GGCCCGACCG AGGGCGTGGA CCTGTGGTGG TCCGGCAAGA TCTCCAACCA CGGCGGCAAC ATCCAGATCC TCTCGGCCCC CGACGACGGC TGGCCGCTGT GGGTCTCGGA CGTCAGGCCC GGCCGCGAGC ACGACTCGAC CGCGCTGTGC GCCGGAGGCG CGCAGCCGAT CCTTGAGGAA TGGGCCGCCG ACCCGCACGA GGTCCTGTTC GACCTCGGTT ACGAAGGGTT GGGTAGCCCG GCCGGACCGC TCGCGACCGC CTACAAGAAG CCCAAGGGCG GCGCCCTCAC CGACGAACAG AAGGCGCACA ACCGGGTCCA CAACGCGCTG CGCGCCGTCG GCGAACGCGC GAACGCGCTG CTCAAGGTCA CCTTCCGGCT GCTCCGCAAC ATCACGATCG ACCCCTGGAA GATCGGACTC GTCGCGAAAG CCGCCCTCGT CATCCTCCAC ACCGAGCACC GCAGGACCGC CTGA
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Protein sequence | MSFTYTAELP LGDHTVFRLA GLLVAERQRR GTRNGTRTLS TLEQAVMVLR WFCDGTRTSR LFKDHGVSRS VGYRYLHEGI AVLAWQAPDL REALMRARIA GYGHLIIDGT IIETDRLRMP GPTEGVDLWW SGKISNHGGN IQILSAPDDG WPLWVSDVRP GREHDSTALC AGGAQPILEE WAADPHEVLF DLGYEGLGSP AGPLATAYKK PKGGALTDEQ KAHNRVHNAL RAVGERANAL LKVTFRLLRN ITIDPWKIGL VAKAALVILH TEHRRTA
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