Gene Franean1_5748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5748 
Symbol 
ID5674074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6985405 
End bp6986238 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content68% 
IMG OID641244601 
Producttransposase IS4 family protein 
Protein accessionYP_001510004 
Protein GI158317496 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.970516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTCA CATACACCGC CGAGTTGCCC CTCGGCGATC ACACCGTCTT CCGCCTGGCG 
GGTCTTCTCG TCGCGGAGCG TCAGCGTCGC GGCACTCGCA ACGGCACCCG CACGCTGTCC
ACGTTGGAAC AGGCGGTCAT GGTCCTGCGC TGGTTCTGTG ACGGCACCAG GACCAGCCGG
CTCTTCAAGG ATCACGGGGT GTCCCGGTCG GTGGGCTACC GCTACCTGCA CGAGGGCATC
GCCGTGCTTG CCTGGCAAGC CCCTGACCTG CGCGAAGCGC TGATGCGCGC CAGGATCGCC
GGCTACGGCC ACCTCATCAT CGACGGTACG ATCATCGAGA CCGACCGGCT GCGCATGCCC
GGCCCGACCG AGGGCGTGGA CCTGTGGTGG TCCGGCAAGA TCTCCAACCA CGGCGGCAAC
ATCCAGATCC TCTCGGCCCC CGACGACGGC TGGCCGCTGT GGGTCTCGGA CGTCAGGCCC
GGCCGCGAGC ACGACTCGAC CGCGCTGTGC GCCGGAGGCG CGCAGCCGAT CCTTGAGGAA
TGGGCCGCCG ACCCGCACGA GGTCCTGTTC GACCTCGGTT ACGAAGGGTT GGGTAGCCCG
GCCGGACCGC TCGCGACCGC CTACAAGAAG CCCAAGGGCG GCGCCCTCAC CGACGAACAG
AAGGCGCACA ACCGGGTCCA CAACGCGCTG CGCGCCGTCG GCGAACGCGC GAACGCGCTG
CTCAAGGTCA CCTTCCGGCT GCTCCGCAAC ATCACGATCG ACCCCTGGAA GATCGGACTC
GTCGCGAAAG CCGCCCTCGT CATCCTCCAC ACCGAGCACC GCAGGACCGC CTGA
 
Protein sequence
MSFTYTAELP LGDHTVFRLA GLLVAERQRR GTRNGTRTLS TLEQAVMVLR WFCDGTRTSR 
LFKDHGVSRS VGYRYLHEGI AVLAWQAPDL REALMRARIA GYGHLIIDGT IIETDRLRMP
GPTEGVDLWW SGKISNHGGN IQILSAPDDG WPLWVSDVRP GREHDSTALC AGGAQPILEE
WAADPHEVLF DLGYEGLGSP AGPLATAYKK PKGGALTDEQ KAHNRVHNAL RAVGERANAL
LKVTFRLLRN ITIDPWKIGL VAKAALVILH TEHRRTA