Gene Franean1_5708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5708 
Symbol 
ID5674034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6925738 
End bp6926241 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content76% 
IMG OID641244561 
Productpeptidase C60 sortase A and B 
Protein accessionYP_001509964 
Protein GI158317456 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.312966 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCACGG GCACCGGAGC CGGCACGGGC ACCGCGGCCG GCACGGGCGC GGGTTCGGTC 
CAGGCCGCCG ACCCGGTACG GGTCCGGATC CCGGCCATTG CCGTCTCGGC GCCCGTCGTG
CCGTTGTCCC TCGACGGTGG CGGGCGGCTG CGGGCACCGG ACGGGTTCAG CGAGACCGGG
TGGAACGCCG CGGGTCCCGA ACCGGGCGAG ACGGGCACCG CGGTGATCGC CGGCCACGTG
GACTCGAGGA CGGGCCCGGC GGTCTTCTTC CGCCTGCGGG ACCTCGCCCC CGGGGACCGG
GTGGAGGTCG AGCGAGCGGA CGGGTCGTCC GTGGCCTTCG TGGTGCGCAG GCTGGCCCGC
TTCCCGAAGG ACGCGGTGCC CGCCGCCGAC GTCTACGGCT CCACGGGGGC GCCCGCGCTG
CGGCTCATCA CCTGCGGGGG TGTCTTCGAC CAGGCCCGTT CCAGCTACCG GGACAACGTC
GTGGTGTTCG CCGACCTGGC CTGA
 
Protein sequence
MGTGTGAGTG TAAGTGAGSV QAADPVRVRI PAIAVSAPVV PLSLDGGGRL RAPDGFSETG 
WNAAGPEPGE TGTAVIAGHV DSRTGPAVFF RLRDLAPGDR VEVERADGSS VAFVVRRLAR
FPKDAVPAAD VYGSTGAPAL RLITCGGVFD QARSSYRDNV VVFADLA