Gene Franean1_5657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5657 
Symbol 
ID5673984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6868560 
End bp6869306 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content74% 
IMG OID641244511 
ProductNUDIX hydrolase 
Protein accessionYP_001509914 
Protein GI158317406 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCTCCG TCTCGTCGGC GAACGTGACG TCCGGCGCGA CTGGCGGCGA CCCGGCCCGG 
ATACCGGCCG TCGCCGTCAG CGTCGATGTC GTCCTGCTGA CCCTGCGCGC CGGACGGCTG
TGCGTCCTTG TCATCCAGCG CGACAGCGAG CCGTTCCGCG GTTGCTGGGC GCTGCCCGGC
GGCTTCGTCG GACCGGACGA GGACCTCGAC TCCTCCGCGC TGCGCCAGCT CGCCGAGGAG
ACCGGGGTGA CCACCGCCGG CCACCTCGAG CAGCTGCGCA CCTACGGCTG CCCGACCCGG
GACCCGCGGA CCCGGGTCGT CAGCGTCGCC TATTTGGCCC TGCTGCCGAA CCTCCCGCAG
CCCACCGCGA GCGGGAACGG ACCGCAGGCC CGCTGGTGGC CGGTCGAGGA CCTGGGCTCC
CCGGACGGTC CTACCCTGGC CTTCGACCAT CCGCAGATCG TCTCGGACGG AGTCGAGCGG
GCGCGCGGCA AACTCGAGTA CACGTCGCTG GCGGCCGCCT TCTGCGAGGA GCCGTTCACC
CTGGCCGACC TGCGCCGGGT GTACGAGGCG GCCTGGGGCG TGGTCCTGGA CCCGCCCAAC
TTCCGGCGCA AGGTGCTCTC CACCCCGGGC TTCGTCGTCG CGGTCGGCCA GCGGGCCTCC
CCACGCGGCG GCGGCCGTCC AGCCGAGCTC TACCGCCTCG GCTCCGCGAC CGCCCTACAC
CCCCCGCTAC TCCGCCGCTC GGTTTAG
 
Protein sequence
MASVSSANVT SGATGGDPAR IPAVAVSVDV VLLTLRAGRL CVLVIQRDSE PFRGCWALPG 
GFVGPDEDLD SSALRQLAEE TGVTTAGHLE QLRTYGCPTR DPRTRVVSVA YLALLPNLPQ
PTASGNGPQA RWWPVEDLGS PDGPTLAFDH PQIVSDGVER ARGKLEYTSL AAAFCEEPFT
LADLRRVYEA AWGVVLDPPN FRRKVLSTPG FVVAVGQRAS PRGGGRPAEL YRLGSATALH
PPLLRRSV