Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5657 |
Symbol | |
ID | 5673984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 6868560 |
End bp | 6869306 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641244511 |
Product | NUDIX hydrolase |
Protein accession | YP_001509914 |
Protein GI | 158317406 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCTCCG TCTCGTCGGC GAACGTGACG TCCGGCGCGA CTGGCGGCGA CCCGGCCCGG ATACCGGCCG TCGCCGTCAG CGTCGATGTC GTCCTGCTGA CCCTGCGCGC CGGACGGCTG TGCGTCCTTG TCATCCAGCG CGACAGCGAG CCGTTCCGCG GTTGCTGGGC GCTGCCCGGC GGCTTCGTCG GACCGGACGA GGACCTCGAC TCCTCCGCGC TGCGCCAGCT CGCCGAGGAG ACCGGGGTGA CCACCGCCGG CCACCTCGAG CAGCTGCGCA CCTACGGCTG CCCGACCCGG GACCCGCGGA CCCGGGTCGT CAGCGTCGCC TATTTGGCCC TGCTGCCGAA CCTCCCGCAG CCCACCGCGA GCGGGAACGG ACCGCAGGCC CGCTGGTGGC CGGTCGAGGA CCTGGGCTCC CCGGACGGTC CTACCCTGGC CTTCGACCAT CCGCAGATCG TCTCGGACGG AGTCGAGCGG GCGCGCGGCA AACTCGAGTA CACGTCGCTG GCGGCCGCCT TCTGCGAGGA GCCGTTCACC CTGGCCGACC TGCGCCGGGT GTACGAGGCG GCCTGGGGCG TGGTCCTGGA CCCGCCCAAC TTCCGGCGCA AGGTGCTCTC CACCCCGGGC TTCGTCGTCG CGGTCGGCCA GCGGGCCTCC CCACGCGGCG GCGGCCGTCC AGCCGAGCTC TACCGCCTCG GCTCCGCGAC CGCCCTACAC CCCCCGCTAC TCCGCCGCTC GGTTTAG
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Protein sequence | MASVSSANVT SGATGGDPAR IPAVAVSVDV VLLTLRAGRL CVLVIQRDSE PFRGCWALPG GFVGPDEDLD SSALRQLAEE TGVTTAGHLE QLRTYGCPTR DPRTRVVSVA YLALLPNLPQ PTASGNGPQA RWWPVEDLGS PDGPTLAFDH PQIVSDGVER ARGKLEYTSL AAAFCEEPFT LADLRRVYEA AWGVVLDPPN FRRKVLSTPG FVVAVGQRAS PRGGGRPAEL YRLGSATALH PPLLRRSV
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