Gene Franean1_5654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5654 
Symbol 
ID5673981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6866526 
End bp6866972 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content67% 
IMG OID641244508 
ProductMov34/MPN/PAD-1 family protein 
Protein accessionYP_001509911 
Protein GI158317403 
COG category[R] General function prediction only 
COG ID[COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCC GATCCGGCCC GTTCGCGTCG TACGGTTGTC GCGTGCTGCG CATCGACCGA 
ACCCACTACG AGGCGATCGT CGCCCATGCC CGCCGCGACC ATCCCGACGA GGCGTGCGGC
GTCATCGCCG GGCCCGAGGG CTCGGATCGG CCGGAGCGTC ACATCCCGAT GGTCAACGCC
GCACGCTCAC CCACCTTCTA CGAGTTCGAC CCGGCCGAGC AGATCAAGGT GTGGAACGAG
ATGTTCGACC GCGACGAGGA TCCGGTCGTG ATCTACCACT CCCACACCGC CACGGAGGCG
TACCCGTCGC GCACCGACAT CTCCATCGCG GGGTACCCCG AGGCGCACTA CGTCCTCGCC
TCGACGCGGG ATCCAGAGAC GATCGAGTTC CGCTCCTTCC GGATCGCGGA CGGTGAGGTC
ACCGAGGAAC CCGTGGAAAT CCTCTGA
 
Protein sequence
MDARSGPFAS YGCRVLRIDR THYEAIVAHA RRDHPDEACG VIAGPEGSDR PERHIPMVNA 
ARSPTFYEFD PAEQIKVWNE MFDRDEDPVV IYHSHTATEA YPSRTDISIA GYPEAHYVLA
STRDPETIEF RSFRIADGEV TEEPVEIL