Gene Franean1_5632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5632 
Symbol 
ID5673959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6847286 
End bp6848176 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content70% 
IMG OID641244485 
Productelectron transport protein SCO1/SenC 
Protein accessionYP_001509889 
Protein GI158317381 
COG category[R] General function prediction only 
COG ID[COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.765574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGTGA CCAGGAATCC ATCCACCATC AGTTACCTTT CCACTACCCG TCGCGGGCGG 
ACGTCGTCCG CGCTGCTGAT CGGGATCACC GTCGCGGTCA GCGCGACACT CGGCGCTTGC
TCCAACGGCG GCGACGGAAC CGGGGTGACG ATCGTCGACG CCGGCGGAAC CGACGGGGGA
CTACACGGCG TTGTCCCAAC CGAACGCTTC GCGAAGCCGG CGCTCAACCT GACCGATACC
GACGGGCGCC CGTTCGATCT TCGCGCCCGA ACGCAAGGGA AGATCACTCT GCTTTTCTTC
GGCTACACGA TGTGCCCGGA CGTCTGCCCG ACCACCATGG CCGACATCGC CGCGGCCCTG
GACGAGGTCG ACCGGTCGGT GCGGGACCAG GTCTCGGTGG TGTTCGTCAG CACCGACCCG
GACCGTGACA CCGCTCCCGT CCTCGACCGC TGGCTCCGCC AGTTCGACTC GACCTTCATC
GGCGTACGCG GGCCGTTCAA GGACGCGCAG GCCCAGGCCG AGGCGATCGG CGTCCCGCTG
GAGGCACCGA AGGTCCAGGC GGACGGATCC GTCCTGGTCA CCCATGGCAG CCAGGTCATC
GCCTTCGGCC GGGACGCCCG CGCCCGCGTG CTCTACCTGG CCGGCACCCC GGTGGCCGAC
TACATCGCGG ACCTTCCCGT CCTCACGGCC GAGACCCTCG GAACCGACCC GCGCGACGGG
ACCGCGACCG CGACGCCCAG GGCCACCAGC GCGACCAGGG TCACCGCGAT GCCGAGGGTG
ACCGCGGCAC CAGGGGCGAC CGGGTCGCCT GGGACAGCAG GGACAGCAGG GACGACGAAC
GCCGTCCAGA CAACCGGCGA CAGCCGGCCG GCCCGGATCG CCGCAGGATG A
 
Protein sequence
MSVTRNPSTI SYLSTTRRGR TSSALLIGIT VAVSATLGAC SNGGDGTGVT IVDAGGTDGG 
LHGVVPTERF AKPALNLTDT DGRPFDLRAR TQGKITLLFF GYTMCPDVCP TTMADIAAAL
DEVDRSVRDQ VSVVFVSTDP DRDTAPVLDR WLRQFDSTFI GVRGPFKDAQ AQAEAIGVPL
EAPKVQADGS VLVTHGSQVI AFGRDARARV LYLAGTPVAD YIADLPVLTA ETLGTDPRDG
TATATPRATS ATRVTAMPRV TAAPGATGSP GTAGTAGTTN AVQTTGDSRP ARIAAG