| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5603 |
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| Symbol | |
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| ID | 5673931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6796408 |
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| End bp | 6797796 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641244457 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001509861 |
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| Protein GI | 158317353 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.447806 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00691492 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGCCCA GGTGGCCCGC CGGCGGGTCC GGTCCGGACA GTGGCGGTCG TCGCGGCCGG
GGATCCCGTG TCCCTGTTCG CGCCCGGCGC CGCGCGTCGA GGCCCGGATG GGGCATGCTG
GTCGGGCGAA TCGATCTGCT GCCGTCGCAC ACCGTCGGGC GGGGGTGCCC GACCAGGGGC
CGCCCGATCC ACGACCTGGC CCGGAGTGGT GATCAGATGG ACCTGACCTT CAGCGCCGCG
GAGGAGGCGT TCCGCGCGGA CCTGCGGAGC TGGCTCGCCG GGAGCGTCCC CGCGGCGTGG
CGGGAGCCGG GCTTCTGGGC GGGTGTCCCC GACGACGAGG ACTTCGAGCT ACGCCGGGAG
TGGGAGCGCC GCAAGTTCGA GGCGGGCTTC GCCGGCATCG ACTGGCCTAC CGAGTACGGC
GGGCGCGGCG GCACCCCCGG CATGAAGGCG ATCTACGACC AGGAGCTGGC GCTCGCCCGC
GCGCCGGGAA CCGTCAACCC GCTCGGGCTC GCCTTCCTCG CCCCGACGAT CATGGCGATC
GGCACGGACG AGCAGAAGCG TGAGATCATC CGTCCGCTGC TGCGCTGCGA CGTGATCTGG
TGCCAGGGCT TCTCCGAGCC GGACGCGGGC TCCGACCTGG CCGCACTGCG GACGTCCGGC
GTGGCCGACG GCGACGACAT CGTCGTCAAC GGCCAGAAGG TCTGGACGAC CAACGCCGGC
CACGGTGACC GGATCTTCAC CATGGTCCGC ACCGAGCCGG GCAGCCAGCG CCACCGCGGC
CTGTCGATGC TGCTGCTCGA CATGCACCAG GACGGCGTCG AGGTGCGGCC GCTGCGGCAG
ATGAGTGGGG CGACCGAGTT CGGCGAGGTG TTCTTCACCG ACGCCCGGGT CCCCGCCCGC
GAGTGCCTCG GCGGCCTGGG CAACGGCTGG GCCACCGCGA TGCTGCTGCT CTCCTTCGAA
CGCGGCGCGT CGGGCATCTC GCAGTACACC GCCTTCCGGC AGTCCTACGA CGAGATCGTC
CGGGCGGCCC GCGCGCTGGG GCGGGACACC GACCCGGTGC TGCGCCAGGA GCTCGGCCGC
CGGATGGTCG AGCTCGAGTG CCTGCGCTAC CACGCCATGC ACGTGCTCAC CCAGGTGGAG
CGGGGCGCCG ACCTGGGCGC CGAGTCGTCG ATGACCAAGC TGCAGTGGTC CGAGACCTAC
CAGGACCTGT TCGAGACCTT CGACGACCTG CTGGGCGCCG ACGCCGCGGT CAGCACCCCC
GTCGCGGGCC TCGATCTCTC CGCCCTGCAG TCGGAGGGGT TCTGGTCCAG GTCGGTCACC
ATCTGGGGCG GCTCGTCGCA GGTGCAGCGC AACATCGTCG CCGAGCGGGT TCTCGGCCTG
CCGCGCTGA
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| Protein sequence | MMPRWPAGGS GPDSGGRRGR GSRVPVRARR RASRPGWGML VGRIDLLPSH TVGRGCPTRG
RPIHDLARSG DQMDLTFSAA EEAFRADLRS WLAGSVPAAW REPGFWAGVP DDEDFELRRE
WERRKFEAGF AGIDWPTEYG GRGGTPGMKA IYDQELALAR APGTVNPLGL AFLAPTIMAI
GTDEQKREII RPLLRCDVIW CQGFSEPDAG SDLAALRTSG VADGDDIVVN GQKVWTTNAG
HGDRIFTMVR TEPGSQRHRG LSMLLLDMHQ DGVEVRPLRQ MSGATEFGEV FFTDARVPAR
ECLGGLGNGW ATAMLLLSFE RGASGISQYT AFRQSYDEIV RAARALGRDT DPVLRQELGR
RMVELECLRY HAMHVLTQVE RGADLGAESS MTKLQWSETY QDLFETFDDL LGADAAVSTP
VAGLDLSALQ SEGFWSRSVT IWGGSSQVQR NIVAERVLGL PR
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