| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5582 |
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| Symbol | |
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| ID | 5673910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 6764873 |
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| End bp | 6767284 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641244436 |
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| Product | ABC transporter related |
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| Protein accession | YP_001509840 |
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| Protein GI | 158317332 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components
[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0235423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGGGT GTTGTCGTCT CGCTGGCGAG GCGAGATCTG TCGTAGGTCT GGGAGACGAT
CCCGACGTAC CACCGGATCA TGCCGGCCCA ACCAGGCGAT CCTCGAGTGT GGCGATCATC
GAGTGTCTAC GGGAGGTGCA CATGTCGTCC AAAGCTCCGC CCCCGACCGG CCCGGCGGCC
GGCCCTGGCG CTGCCGGAGC TGACGCCGCC GGAGCTGACG CCGCCGGAGC TGACGCCGAC
CACGGTGAGG GCTCCGGTGC TGCCGGTGGC CGCCGCGGGG CGGATCGCGG CGCCCCGCTG
GTCCCCACTC TCATGGCGCT CCTTCTGGCC CGTCTCACCG CGAGCCGGAC GGCGCGGCGC
GGGGTCCGCT TCTTCGACGA CCAGGGCGGC CGGCTGGTGG CCATCGTCGC GCTGGATCTC
GTCGGCGCTG TGTCCGTGGC CGTCACGCCG TTCGTGCTGC GCGCGGTCGT CGACGACGGG
CTGATCGACC AGTCCGCCAC CCAGGACAGA ACCGCGCTGG TCGGCCAGGT CGCGCTGCTC
CTGGCCGCCT TCCTTCTCCA GGCGTTGCTG GGCGCCGTCT CGACCCTCGT CGGTTCGGGT
GTCGGTGAAC GGGTGCACAT GCGCGCGACC GTCGCGATCC ACGACCAGTT GCTCCGGCTG
CCGTTCTCGT TCTTCCCCGG CCAGCGGCAC GGCGACGTCC TGACCCTGTT CGGCGGGGAC
ATCGCCGAGG TCCGCAGCGC GGTGTCGCTC TCCGTCCCGC GCGCGATCAG CGCCGGGGTC
ACCGCGGTGG TGGGCGTGGT GAGCATCGTC CTGCTGGACT GGCGGCTCGC GCTGGTCGCC
GTGCTCCTGT CTCCGCTGGT CTTCGGCCTG ATGACGCTGG GCCGGCGCCG CGGACGCGAG
CTGACCAGGG AGCACATCAA GCTGCGCTCG GCGCACTTCG CCCTGATCAC CGACACGACG
AGCGTGTCGG GAGCCCTGCA CGTACGGCTG TTCGGGCGCA GCATGTACGA GTCCGGCCGG
CTGGCCACGA TCGCCGACCA GACCCGCCGG ATCTCCCTGA AGCGGATCAG GGTGTCCGCG
CTGGCGCAGC TCATGTCGTC GGCTGGTGCA GCGCTCGCCA TCGTCGCCGT GATGAGCGTC
GGCATCTGGC TCGTCAGCAC CCAGCGCGCG ACCGTCGGAA CGCTGGTCGC GTTCGCGAGC
GCGCTGCTGT TCGCGTACCG CCCGGTCACC GGCCTGGCCG AGAGCCGGGC CGACCTGATC
GAGGCCGGTG TCGCCTTCGA CCGGATCTTC GGGCTGCTCG ACCTGGTGCC CGACCCGCGG
GACCTCCCCA CCACCACCGC CGGGCCGGCG GGCCGGCCGG CCCCGGGCAG GTCCGCGGCA
GCCGGGGCGG CCAGGGCGGC GGAGTCGAGC ACCGGGCTGG TCGGGGTTCC GGCTCCCCGT
GGGGCCACCG GGCCGGGCGC GGGCGCGCCG GCCGCGGGGA GCGGCACGGC ACCGGCCGAG
GCGAGCGCGC CCACCGTCCG CGCGCCCGAG ATCGTGGTGG ACGGAGTGTG GTTCCGCTAT
GCCGGCGGCC GGCAGAACGC CTGGTCCGCC GCCGGCCGGG ACGTGCGCCG CCGGTGGTGG
TACGTCGCGG ACGATGAGGA GGACGAGGAC CAGGAACCCG AGCAGGCGGC CTCGGGTGAG
GCCGCCCAGG CCGGGGAGGC CGGCCCCGCG GGCCGCTGGG CCCTGCGCGA TGTCCGGCTC
ACCGCCGGGG CCGGCAAGAA GACGGCGATC GTCGGAGCGA GCGGCGCGGG CAAGACGACG
CTCGGCTACC TCCTGTCCGG GGTGCACCGC CCCGACCGCG GCCGCCTCCT GCGCGACGAC
ACGGACTTCA CCGACCTCAC CTGGAGCGCA TTGCGGGCGA CGATCGGAGT CGTCCCGCAG
GACCCGCACC TGTTCAACGA CACGATCGCC GCGAACGTCC GCTACGGACA GCTCGACGCC
ACCGACGAGG CGATCACCGC GGCGGTGGTC GACTCGGGCC TCGGCCCGAT GCTGGAGCGG
CTGCCCAAGG GCATCCGGAC GAAGGTCGGT GCCCGGGGCT ACCAGCTCTC GGGCGGGGAG
CGCCAGCGCC TCGCGCTCGC CCGGGTCCTG ATCGCCGACC CGCCGGTGCT CATCCTGGAC
GAGGCGACCT CCCAGCTTGA CGCGACGACC GAGCACACCG TCCAGGAGGC GCTGACCCGC
CTCGGGGCGG GGCGGACCCG CATAGTCATC GCGCACCGGC TGTCCACGAT CGTCGACGCC
GACCGCATCT ACGTGATGGG TGACGGCTCC GTGGTCGAGC ACGGCACCCA CGACGAGTTG
ATCCAGGCCG ACGGCGCCTA CGCGCGCCTG TACCACCACC AGCTCCGGAA GGAGGTCACC
ACAGCAGGTT GA
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| Protein sequence | MSGCCRLAGE ARSVVGLGDD PDVPPDHAGP TRRSSSVAII ECLREVHMSS KAPPPTGPAA
GPGAAGADAA GADAAGADAD HGEGSGAAGG RRGADRGAPL VPTLMALLLA RLTASRTARR
GVRFFDDQGG RLVAIVALDL VGAVSVAVTP FVLRAVVDDG LIDQSATQDR TALVGQVALL
LAAFLLQALL GAVSTLVGSG VGERVHMRAT VAIHDQLLRL PFSFFPGQRH GDVLTLFGGD
IAEVRSAVSL SVPRAISAGV TAVVGVVSIV LLDWRLALVA VLLSPLVFGL MTLGRRRGRE
LTREHIKLRS AHFALITDTT SVSGALHVRL FGRSMYESGR LATIADQTRR ISLKRIRVSA
LAQLMSSAGA ALAIVAVMSV GIWLVSTQRA TVGTLVAFAS ALLFAYRPVT GLAESRADLI
EAGVAFDRIF GLLDLVPDPR DLPTTTAGPA GRPAPGRSAA AGAARAAESS TGLVGVPAPR
GATGPGAGAP AAGSGTAPAE ASAPTVRAPE IVVDGVWFRY AGGRQNAWSA AGRDVRRRWW
YVADDEEDED QEPEQAASGE AAQAGEAGPA GRWALRDVRL TAGAGKKTAI VGASGAGKTT
LGYLLSGVHR PDRGRLLRDD TDFTDLTWSA LRATIGVVPQ DPHLFNDTIA ANVRYGQLDA
TDEAITAAVV DSGLGPMLER LPKGIRTKVG ARGYQLSGGE RQRLALARVL IADPPVLILD
EATSQLDATT EHTVQEALTR LGAGRTRIVI AHRLSTIVDA DRIYVMGDGS VVEHGTHDEL
IQADGAYARL YHHQLRKEVT TAG
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