Gene Franean1_5503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5503 
Symbol 
ID5673834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6668216 
End bp6668614 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content74% 
IMG OID641244358 
Producthypothetical protein 
Protein accessionYP_001509764 
Protein GI158317256 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.125578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.278605 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGATC TGTTCGAGTA CGCGATGATC CGCGTCGTGC CGCGAGTCGA ACGCGGCGAG 
TGCGTCAACG TCGGTGTCCT GCTGTGGTGC CAACGGGCCG GCTTCCTCGG CTCGCGGTGC
GTCGTCGACC GGGAGCGCCT CGCCAGCCTC GATCCGTTCC TCGACCAGGA CGCGGTGTCG
GCGAGCCTCG CGGCCCTGCG CCGGGTCTGC GCCGGCGGCC TCGACGCCGG ACCGCCTGGC
CGGCTCCCCG GCGGGGAACG GTTCCGCTGG TTGACGGCCC CGCGCAGCAC CGTGGTGCAG
ACGTCGGCCG TCCACACCGG TTTCACCGAC GACCCCGCCG CCGAGCTGGA CCGGCTGGTC
GAGCTGCTCG TCGCCCGCCC CGGTCCGCCG CGGGGCTGA
 
Protein sequence
MPDLFEYAMI RVVPRVERGE CVNVGVLLWC QRAGFLGSRC VVDRERLASL DPFLDQDAVS 
ASLAALRRVC AGGLDAGPPG RLPGGERFRW LTAPRSTVVQ TSAVHTGFTD DPAAELDRLV
ELLVARPGPP RG