Gene Franean1_5490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5490 
Symbol 
ID5673821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6643775 
End bp6645088 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content76% 
IMG OID641244345 
Productputative cytochrome P450 
Protein accessionYP_001509751 
Protein GI158317243 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2124] Cytochrome P450 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0347822 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.45285 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACCG CCCGCGAGCC GGCGCGCGAG TCACTCCGCG GGCCGGCTCG CGAGCCGGCC 
CGCGAGCCGG CCCGCGCGGC GCGGGAGCGG CCGCCCGGCG GCCGGACCCC GCCCTGCCAC
CTGGGCGAGG CGCAGTTCCA GGGTGGGCCG GCGCGGGCCT ACCGCGACCT GCGCCGGAAG
CACGGCGCCG TCGCGCCCGT GCTGCTCGAC GGCGGCCTGC CGGCCTGGCT GGTCCTCGGC
TACCGGGAGC TGCACTACGT CCTGAGCCAT CCGGAGATCT TCGCCCATGA CCCGCGTCAC
TGGGCCGGCT GGGACGACGT CCCGCCCGAC TGGGCCGCCC TGCCCGGTGT CGGACACCGC
CCGTCCGTGC TCCGCGCCGA GGGAGCGGAG CACCGGCGGC GCTACACCGC CATCCAGGAC
GTCCTCGGCG CGGTGGATCT CTTCGAGCTC CGGGCCCGCG CCGAGGAGAT CACCGACGAC
GTGATCGACG CCTTCGCCGG GCGCGGGGAG ACCGATCTGA TCGACTCGTT CGCGCACCGG
GTGCCCGCCC TCGTCCTGGC GTCGCTGTGC GGGCCGCCGG AGGTCGACAC CGCGGGCCTG
GTGCACGACC TGATCGTCCT GATCGACGAC GGCCCGGACG CGGCCGAGAG CCACCAGCGG
GTCCTGGACC GGCTGCGGTG GCTGCTCGCC GACCGGCGCG AGCATCCCGA CGACGACATC
GTCTCGCGCC TGATCGCCCA CCCGGCCGGG CTCGCCGACG AGGAGGTCGT CGAGGACCTC
GCCGTGGTGT TCGGGTTCGG CGCGCGCGCC GTGGCCGGCT GGATCGGCAA CTCGCTGCGC
CTGCTGCTCA CCGACGGGTC GTTCGCCCTC GACCTGTCCG GCGGACGGCG CAGCGTCATG
CAGGCGCTGA ACCAGGTCCT GTGGGAGGAC ACGCCGATGC AGGTCGTCGC CGGCCGGTGG
GCGACCCGCA ACACCCAGCT CGGCGGGCAG CGCATCGAGG CCGGCGACAT GATCGCGCTC
GGGCTCGGGG CCGGCAACGC CGATCCGCAG GTCCGCCGCG GCCACGCCCC GGACACCCAG
ACGGGCGCGG GGACCAGCGC CAACAGCGCC CACCTGTCCT TCGGCCACGG CGAGCACCGC
TGCCCGTACC CCGCGCAGGA GATCGCCGAG GTCGTCACCC GGACCGCGGT CGAGGCACTC
CTCGACCGCC TGCCCAACAT GTGGATCGCC GTCCCGGCCG ATGCCCTCGG CTGGCGGCGG
ACCGCGTGGA ACCGCGCTCT GACGGCGTTG CCGGTCCGGT TCAGTCCCGT GTGA
 
Protein sequence
MTTAREPARE SLRGPAREPA REPARAARER PPGGRTPPCH LGEAQFQGGP ARAYRDLRRK 
HGAVAPVLLD GGLPAWLVLG YRELHYVLSH PEIFAHDPRH WAGWDDVPPD WAALPGVGHR
PSVLRAEGAE HRRRYTAIQD VLGAVDLFEL RARAEEITDD VIDAFAGRGE TDLIDSFAHR
VPALVLASLC GPPEVDTAGL VHDLIVLIDD GPDAAESHQR VLDRLRWLLA DRREHPDDDI
VSRLIAHPAG LADEEVVEDL AVVFGFGARA VAGWIGNSLR LLLTDGSFAL DLSGGRRSVM
QALNQVLWED TPMQVVAGRW ATRNTQLGGQ RIEAGDMIAL GLGAGNADPQ VRRGHAPDTQ
TGAGTSANSA HLSFGHGEHR CPYPAQEIAE VVTRTAVEAL LDRLPNMWIA VPADALGWRR
TAWNRALTAL PVRFSPV