Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5489 |
Symbol | |
ID | 5673820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 6643158 |
End bp | 6643778 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641244344 |
Product | protein of unknown function ATP binding |
Protein accession | YP_001509750 |
Protein GI | 158317242 |
COG category | [R] General function prediction only |
COG ID | [COG2229] Predicted GTPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00448291 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.422936 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACTCCA GAAGCTCTGA GCCCGCCGCC CGGCCGCCGC TGCAGACCAC GGCCCGGGAC GGCGTCAAGA TCGTGATCGT CGGTGGTTTC GGTGTGGGCA AGACCACGAT GGTCCGTTCG GTCAGCGAGA TCCGGCCGCT GAGCACGGAG GAGGTGATGA CCGAGGCCGG CGTCGGCATC GACGACAACG GCGACGTCCT CGAGAAGAAC ACGACCACGG TCGCGTTCGA CTTCGGACGG ATCAGTCTCG ACGCCGAGAT GGTGCTCTAC CTGTTCGGCG CCCCCGGCCA GGAGCGGTTC TGGTTCCTGT GGGAGCGGCT GTTCGCGGGG ACGCTCGGGG CGGTGGTGCT CGTCGACACC CGGCGGGTCG CCGACTCGTG GTACGCGATC GACCGGCTCG AGCACCACCG GATGCCCTTC ATCGTGGCGC GGAACAACTT CGGCTCCCCC GAGCACTCGC TGGAGGACCT GCGCGAGGCG CTCTCGCTGT CACCCGACAT CCCCGTGATC GACTGCGACG CCCGGGCCCG GTCGTCCAGC AAGGACGTGC TGATCACCCT CGTGCGCCAC CTCTGCGAGC TGTCCGCGGC GCGCGAGGAG CGCGAGGCGG AGGCGTCGTG A
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Protein sequence | MDSRSSEPAA RPPLQTTARD GVKIVIVGGF GVGKTTMVRS VSEIRPLSTE EVMTEAGVGI DDNGDVLEKN TTTVAFDFGR ISLDAEMVLY LFGAPGQERF WFLWERLFAG TLGAVVLVDT RRVADSWYAI DRLEHHRMPF IVARNNFGSP EHSLEDLREA LSLSPDIPVI DCDARARSSS KDVLITLVRH LCELSAAREE REAEAS
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