| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5427 |
|---|
| Symbol | |
|---|
| ID | 5673758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 6565919 |
|---|
| End bp | 6566449 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641244282 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001509688 |
|---|
| Protein GI | 158317180 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.170324 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTTCC TGTTCAGTGG TGCGTCCCTG GCCGTTCGGC TTGAGCGTGA CCAGAGCGGG
GTGACGTCCT ACTACGGCCC GTCGCGCGGC ATCGGTTGGC TGGCGGTCGC GGTGGCCGGT
TACACGGCGC CCTCGCTGTT CGGCCTCGCC GGCGCCGCGC TGTCGTCGAG CGGCAATGTC
ACGGCTACGC TGATACTCGG CGGCCTGGCG ATCATCGGTC TGCTGCTGGT GGTGGAGAAT
TCCTTCGGCG GGCTGGTGGT CGGCGTCATG CTGGCATTTC TCGCTCTGGT CGCGACCAAA
GGCTCCCCAG GGGTGCAGCT GTTCGTCGCC TGCACGGTGA GCTGGTTTCT GCTGTTCGCG
GCGATCCGGT CGTTAGGTAT TCTCCGGCGG GCTCGACGGT TCTCCCGGTC TTCCGACGCC
GACGCGTTGG CCAGGGTGAC GCACCTGCCG GCGCCGGTGT GGGTAGCGGT CTTCTATGCC
ATCGACCTCT ACTGTCTGAT CCTCGGCGGC CGGCTGCTGC TCGACGGCTG A
|
|---|
| Protein sequence | MAFLFSGASL AVRLERDQSG VTSYYGPSRG IGWLAVAVAG YTAPSLFGLA GAALSSSGNV
TATLILGGLA IIGLLLVVEN SFGGLVVGVM LAFLALVATK GSPGVQLFVA CTVSWFLLFA
AIRSLGILRR ARRFSRSSDA DALARVTHLP APVWVAVFYA IDLYCLILGG RLLLDG
|
|---|
| |