| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5357 |
|---|
| Symbol | |
|---|
| ID | 5673691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 6461468 |
|---|
| End bp | 6462817 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641244215 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001509621 |
|---|
| Protein GI | 158317113 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTGG CGCAGGATGT GGACGGAGCA ACAGACGGGT CATCCGGGGC GGACGGGCTG
ACCGTTCGCT TGACGGCGTG GGAGGCCCAA GTCAACGCGC TCGCAGTCCT GCAGCTGTGT
GCGACCGGCA AGCTGCGGTG CAGTGAGAAG ACACAGCGGC CGGGTGCGGC CACCGTCACG
GCGGTCGCCG GAGTGTTGCT CCGTGGCGAT TTCTATCTCA CCGAGCCGAT CGCGGCGTTC
GCCTGGCCGC TGTTGCTGCA GGCCGGTGGG CTGGCAGAGG TTAGCGGGGG ACGTCTGGTG
CTGACAGCGC GGGGCCGGTC GGTGCTGGCC AAACCGGCGG CGGAGACCAT CCGGCAGCTG
TGGAGGCGCT GGGTCGGCCA TGCGGTCCTC GACGAGATGA GCCGGATCGA GACGATCAAG
GGTCAGCGGT CCGCCCGGGC GCTGACCGCG GCAGGTCCCC GGCGCAAGGC CGTTGCCGAG
GCGCTCGCGG CCTGCCCGCC AGGCGAGTGG GTGGCGGTGG ACATGCTTTT CACCCGGATA
CGGCGTGGAG GACCGCCGTT CACCGTCGCA CGTGACGTCT GGAAGCTGTA CATCGAAGAT
CCGCAGTACG GCAGCCTGGG ATATGACGGG TTCCACGACT GGCCGCTGCT GGAGGGCCGG
TATCTGCTGT GTCTGCTGTT CGAGTACGCG GGCACGCTTG GCCTCTTTGA TCTCACCTAC
GGCGATCCAG TTGACGCCCG TGACGATTTC CGCGAGAACT GGGGCGCTGA CGACCTGGAC
TTCCTCAGCC GGTACGACGG TTTGCGTGCC GTGCGGATGA ACGCCCTCGG CGCCTATGCG
TTCGGCCTGG CTGACCGGTA CGAGCCCGAG GGGGACAGCA CCGCAGCCGG TCCAGCGCTC
AAGATCCTGC CGAACCTGGA CATCGTCATC ACCGGTGAGG TCCAACCGGC CGACGAACTC
CTCCTGAGCG TTTACGGGCA GCGCGCCTCC GATCGCATCT GGTCCCTGAC CATCAAGTCG
TTGATGGCCG CGATCGACGC GGGTAGACCA GTCGAGGAGC TGCGGCGGTT CCTGACCGAC
CGCGCGGACC ATGAGCTACC GGCCACCGTT GCCAAGCTCT TCGAGGACGT CACCGCCCGC
GCCGGCCAAC TACGGGATCT CGGGTTGGCG CGAGTGATCG AATGTGTCGA CCCGGCGGTG
GCCGCCCTCA TCGCTAACGA CCGCAAACTC CGCCGACTCT GCACCCTGGT AGGCGATCGT
CACATCGCTG TACCCTTGCA GCACGAGGCC GATTTCCGCG CAGCCCTGCG GAAGCTGGGA
TACGCCATAC CTTCCTCGCC AGGGGCGTAG
|
|---|
| Protein sequence | MTVAQDVDGA TDGSSGADGL TVRLTAWEAQ VNALAVLQLC ATGKLRCSEK TQRPGAATVT
AVAGVLLRGD FYLTEPIAAF AWPLLLQAGG LAEVSGGRLV LTARGRSVLA KPAAETIRQL
WRRWVGHAVL DEMSRIETIK GQRSARALTA AGPRRKAVAE ALAACPPGEW VAVDMLFTRI
RRGGPPFTVA RDVWKLYIED PQYGSLGYDG FHDWPLLEGR YLLCLLFEYA GTLGLFDLTY
GDPVDARDDF RENWGADDLD FLSRYDGLRA VRMNALGAYA FGLADRYEPE GDSTAAGPAL
KILPNLDIVI TGEVQPADEL LLSVYGQRAS DRIWSLTIKS LMAAIDAGRP VEELRRFLTD
RADHELPATV AKLFEDVTAR AGQLRDLGLA RVIECVDPAV AALIANDRKL RRLCTLVGDR
HIAVPLQHEA DFRAALRKLG YAIPSSPGA
|
|---|
| |