Gene Franean1_5342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5342 
Symbol 
ID5673676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6441471 
End bp6441947 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content71% 
IMG OID641244200 
Producthypothetical protein 
Protein accessionYP_001509606 
Protein GI158317098 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGACC GTCCTGGCGG ATCGTCGTCG ACGAGCTCGG TCTGCCGGTG TCGATGGAGC 
CACGCCTGTC GGGGCCCGAT CACGGCGAGG CGGACGGCAG GCCCTGGGCG GACATCATCG
CCGAGTTCGG CGGGCACCCC TCAAGGCCGG CCGGAGGAGC CTTTCGCGCC CGGGTCGGAG
AGCTGGGGCC AGTTCCTCGT GCGGGCGGGT GGCTGCCTGC GGGAGTTGGC TGACCGTCAC
GACGGTCAGC GGGTGCTGGT CATCGCGAAC GGCGAGACGG TGGAAGCGGC CCATCGGCTG
CTGATGGGTG TGCCCGCATC GGCCCGCCTG TCCTACGGTT TCTCTGTCGC CTGCGCGTCG
CTGACCTGGT GGTCACACCG CTGGTCCTCG GCCGGGACCA CCCGATGGTC CCTCGTGGTG
CACGGCGCGA CCGACGGCTT CCACTCGATC CGACCCGGTC GGGAGAACCG CGGCTGA
 
Protein sequence
MDDRPGGSSS TSSVCRCRWS HACRGPITAR RTAGPGRTSS PSSAGTPQGR PEEPFAPGSE 
SWGQFLVRAG GCLRELADRH DGQRVLVIAN GETVEAAHRL LMGVPASARL SYGFSVACAS
LTWWSHRWSS AGTTRWSLVV HGATDGFHSI RPGRENRG