| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5341 |
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| Symbol | |
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| ID | 5673675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6438561 |
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| End bp | 6441308 |
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| Gene Length | 2748 bp |
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| Protein Length | 915 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641244199 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001509605 |
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| Protein GI | 158317097 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.795016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTCTG TCGGACCGCC CCGCCCGGGC TCCCCCGCGT TTCTGGCGTC CTCGCTCGAG
CGGTACGGAG AGCAGACGGC GATCATCACC GCCGAGGGCG AGCTGTCGTA CCGGAAGCTG
GGGGCCAGGG TCACCGCCGC CGCCGAGCGA ATCGGTGGCG AGCGACGCCT GGTGCTGCTC
GTGGCGGCCA ACACGGTCGA CGTCCTGGTC ATGTATCTGG CGGCACTGTC GGCCGGGCAC
GCGGTCCTGC TCGTGCCCGG CGACACCTCG GCGCCGACCG GTGCCTCGAC GTCGGTCGAC
GCCCTGATCG ACGCCTACGA CCCGGATGTC GTCATCCGGC CCGCGGGCCC GGCGACCCAT
GTGGAGCAGC GACGCACAGG CACGCGGCAC GTTCTGCACC CTGAGCTGGC GCTGCTGCTG
AGCACCTCCG GCTCGACGGG CTCACCAAAA CTGGTCCGGC TGTCGTACAC GAACCTGCAG
GCCAATGCGG AGTCGATCGC CGAGTATCTC GACGTGCGGC CCAGCGACCG CGCCGCGACG
ACCCTGCCCA TGTACTACTG CTACGGGCTG TCGGTCATCC ACAGCCACCT GTTACGCGGA
GCCGGGCTGG TTCTGACGTC GCTGTCAGTC ATGGACGCCT GCTTCTGGGC GCTGTTCCGG
AAGGCCCGCG GCACCTCCCT GGCCGCCGTG CCGTACACCT TCGACCTGCT CGACAGGATC
GACTTCGACG CGATGTCGCT GCCGCACCTG CGTTACATCA CCCAGGCCGG GGGTCGGCTG
GCACCCGACC GGGTCGCCCA CTACGCCCGG CTCGGGCAGC GCGACGGCTG GGACCTCGTC
GTGATGTACG GGCAGACCGA GGCCACGGCC CGCATGGCCT ACCTGCCGCC ACACCTGGCC
GCGACATACC CGCACGCCAT CGGTGTGCCG ATCCCGGGCG GGTCGTTCCG GCTCGCCCCG
GTGACCGCCG GCGCCGGCAG CCCCGCAGGC GCTGGGAGTC CCGGGGACGT CGGCGAGCTT
GTGTACTCCG GCCCCAACGT CATGATGGGC TACGCGCACA CCGTCGCGGA CCTCGCCCTC
GGCAGGATGC TCGACGAGCT CCACACCGGA GATTTGGCAC GGTGCACCGA CGGCGGGCTC
TACGAGGTCG TCGGCAGGCA GGCCAGGTTC GCCAAGCTCT TCGGGCTCCG GATCGATCTC
CAGCGTGTGG AGGACGTGCT CGCGGGCGAA GGACTCAGCG CCTGCTGCGT GACCGACGAC
GACGCACTCC ATGTGGTCGT GGAGGGCACC GGTGAGACGG CTCCCGTCCG CCGGCTGGTC
GCCCGGGCCT GCCGGCTGCC GGAGAGCGCG GTCCACGTGC ACCGTCGGGA CGCGCTGCCA
CGCCTGACCA CCGGGAAGGT CGACCTGGTC GCGGCTCGGG AGGTGGCCCA CGAGGCGCTC
GGGGCCGCCC CGCGCACGAC CATGCCGTCC GGGCGGGGTG CGCCACTGGA CGGCACAGCC
GCGCTGCGCC GGCTGTTCGC GGACTCGCTC GGCCGGGACG ACGTCACCGA CGACAGCACC
TTCGTGAGCC TGGGCGGGGA CTCGCTGTCC TACGTGGACC TGTCGCTGCG CCTGCAGGAG
CACCTCGGAC GGCTGCCCGC CGACTGGCAC ACCACGCCCC TGCGGGACCT GGAGCCGGCC
GCGTGGCCGA GGCGCCGGGC AGGTGGCTCG ATTGAGACCA GTGTGCTGCT CCGCGCCATC
GCGATCGTGT TGGTCGTCGG GACGCACGCC AACACCTTCG ACGCCGTCGG TGGCATCCCC
GGCGGCGCGC ACCTGCTGAT CGCCGTCGCC GGCTACAACT TCGTCCGTTT CCACCTGACG
CCGGCGCCGC GGTCACAACG CGTGCACGGA CTGCTGCGCA GCATCGCGCA CCTGGTGGTG
CCCAGCGTGC TGTTCATCGC CACGCTCGTG CTCCTGATGG ACGAGCACGG ACTCGCCAAC
ATCGTGCTCC TCAACAGCGT GTTAGGGCCG GCGCAGGCCG GCCCGCCGTG GGAGTTCTGG
TTCATCGAGG CGGTGGTCCA GATCCTGCTG GTCCTCACCG TCCTGCTGGC GGTTCCGGCG
GTCGACCGGC TGCAGCGGCG TTTCCCGTTC GGGTCCGCCC TCGGCGTTCT CGCGGGCGCG
TTGCTGTTCC GGTTCGACGT GGTGGAGCTG CCGGCGGGGC CACGCGACAC GCAGACGTCG
CTGGCCGTGC TCTGGCTGTT CGCGCTCGGC TGGGCCGCCG CCGCGGCGGG CACGGTGTGG
CACCGCCTCG GCGTGACGGC GCTGGCACTG CTCACCGTCC CCGGCTACTT CGCCAACGCG
CGCCGCGAGG ACATCATTCT CGGCGGTCTG GTCCTCCTGA TCTGGACCAC AGACCTGCGC
TGCCCGCGGC TGCCGCGGCG TCTGGCCGGC GTGCTGGCCA GCAGCTCGCT CGCCATCTAC
CTGACGCACT GGCAGGTGTT TCCCGCCCTG CAGGACGACC ATCCGGTGCT GGCACTGCTG
GCCTCCCTCG CGGTCGGCGT CGCGGCCTGG AGGGCATGGT CCCGGGCCAC GACGCTGCTC
CGCCGGCTCC CGGTGGGCGC CCTGGCGTTC CGTGCCGCGC GCCGCCCGCC CCGTGCCGCG
GATGGCGGTA CTCCGGCTGC CGTTTCGGGC CCAGCGCCCC GCCGCGCCCC GTTCGCGCCT
GATGTGCCCA TAGTCACAAT CTCTGGCTCC GAGGTAAGGA TGGGCTAA
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| Protein sequence | MASVGPPRPG SPAFLASSLE RYGEQTAIIT AEGELSYRKL GARVTAAAER IGGERRLVLL
VAANTVDVLV MYLAALSAGH AVLLVPGDTS APTGASTSVD ALIDAYDPDV VIRPAGPATH
VEQRRTGTRH VLHPELALLL STSGSTGSPK LVRLSYTNLQ ANAESIAEYL DVRPSDRAAT
TLPMYYCYGL SVIHSHLLRG AGLVLTSLSV MDACFWALFR KARGTSLAAV PYTFDLLDRI
DFDAMSLPHL RYITQAGGRL APDRVAHYAR LGQRDGWDLV VMYGQTEATA RMAYLPPHLA
ATYPHAIGVP IPGGSFRLAP VTAGAGSPAG AGSPGDVGEL VYSGPNVMMG YAHTVADLAL
GRMLDELHTG DLARCTDGGL YEVVGRQARF AKLFGLRIDL QRVEDVLAGE GLSACCVTDD
DALHVVVEGT GETAPVRRLV ARACRLPESA VHVHRRDALP RLTTGKVDLV AAREVAHEAL
GAAPRTTMPS GRGAPLDGTA ALRRLFADSL GRDDVTDDST FVSLGGDSLS YVDLSLRLQE
HLGRLPADWH TTPLRDLEPA AWPRRRAGGS IETSVLLRAI AIVLVVGTHA NTFDAVGGIP
GGAHLLIAVA GYNFVRFHLT PAPRSQRVHG LLRSIAHLVV PSVLFIATLV LLMDEHGLAN
IVLLNSVLGP AQAGPPWEFW FIEAVVQILL VLTVLLAVPA VDRLQRRFPF GSALGVLAGA
LLFRFDVVEL PAGPRDTQTS LAVLWLFALG WAAAAAGTVW HRLGVTALAL LTVPGYFANA
RREDIILGGL VLLIWTTDLR CPRLPRRLAG VLASSSLAIY LTHWQVFPAL QDDHPVLALL
ASLAVGVAAW RAWSRATTLL RRLPVGALAF RAARRPPRAA DGGTPAAVSG PAPRRAPFAP
DVPIVTISGS EVRMG
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