Gene Franean1_5193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5193 
Symbol 
ID5673527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6235739 
End bp6236554 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content75% 
IMG OID641244047 
Producthypothetical protein 
Protein accessionYP_001509457 
Protein GI158316949 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.559211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCCGG TCGACGGCGT CGCGGTACCG GGGGCGGGCT CTGGCCTCCC GGCCGGGCAC 
GACGACGCCG GTGGCCGGGC CGGTGGGATC GCCAGCCGGG CCGGTGGGTT CGGTGGCCGG
GCCGGTGGGT CCGGCGGCCG CGGCACCGGT GGTGAGCCAC CGGTCACGCT GGCAGAGGCG
GTGGGCGGCC CGCGCGGGAT CATCGACAGT GCCATTCCGA CGGTGGCGTT CGTCACCGTC
AACGCCGAGG CCGGCCTGAC GGCGGGGATC GTCGTCGCGA TCGCGGCGGC GGTCGGGCTC
GTGGTCCTGC GGGTGGTGCG GCACGAGCCC GTCCAGCAGG CGTTCTCCGG GCTCTTCGCG
GTCGGGTTCG CCGCCTTCAT CGCCTCCCGG ACGGGCAGCG CCGAGGGCTT CTTCCTGCCC
TCGATAGCGA AGAACGCCGT CTGCGCCGTC GTCGGCCTCG GCTCGGTCCT CGTCGGGCGT
CCCGTCGGCG GCTACGTGAT GGCCGGCTTC GACCAGCGGT ACTCCAACTG GCGGGAGACA
CCGTCCGTCC GGCGGGCGGC GGTCTGGGCC ACCTTCGTCT GGATCGCGGT GTTCGCGGCG
CGGTTCGCGA TCCAGGGCGT GCTCTACCTC GCGGGGGAGT CCGGCTGGCT CGCGGCGGCG
AACATCGTGC TGGGTCTGCC GTTGTTCGGC GCGGCCGTGC TGGCCACCTT CGCGATCGTC
CGGCGCCTCG CCCCGCTGGC GGAGGACGAG CCGTCCGGGG AGGACGGTCA GACCGGCGAA
CCCGGCCAGC TCGCCGCGGG CATCCCGAAC GACTGA
 
Protein sequence
MTPVDGVAVP GAGSGLPAGH DDAGGRAGGI ASRAGGFGGR AGGSGGRGTG GEPPVTLAEA 
VGGPRGIIDS AIPTVAFVTV NAEAGLTAGI VVAIAAAVGL VVLRVVRHEP VQQAFSGLFA
VGFAAFIASR TGSAEGFFLP SIAKNAVCAV VGLGSVLVGR PVGGYVMAGF DQRYSNWRET
PSVRRAAVWA TFVWIAVFAA RFAIQGVLYL AGESGWLAAA NIVLGLPLFG AAVLATFAIV
RRLAPLAEDE PSGEDGQTGE PGQLAAGIPN D