Gene Franean1_5181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5181 
Symbol 
ID5673515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6219026 
End bp6219598 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content69% 
IMG OID641244035 
ProductTetR family transcriptional regulator 
Protein accessionYP_001509445 
Protein GI158316937 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.752009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTGACC ACTACCTTGA GGTCGTGACC CCAAGGACGA CCGGCGGCAC CGGCACCCGG 
ATGAGCGCGG AGCAACGACG CGCGGTGGTG CTCGCGGCGG CCGTCGAGGA GTTCGCCCTG
GGCGGCCTGA CCGGCACGTC CACCGAGGCG ATCGCCAGCC GTGCCGGCAT CTCCCAGCCC
TATCTGTTCC GACTCTTCCC CACCAAGAAG GAACTGTTCC TGGCGGCCGT CCGGGCCACC
TTCACCCTGA CTCGCGAACG CTTCGAGACC GCGGCGGGCG ACCTGGTCGG CGCCGACGCC
CTGACGGCGA TCGGGTCCGC CTACGACGAG CTGCTCACCG ACCGCACCTA CCTGCTCATG
CAGATGCAGA GCTACGCCTC CTGCGGCGAC CCGGGCATCC AGGAGGTCAC CCGCCAGGGT
TTCCGGGACC TGTGGCAGAC CGTCGAACGC GTCAGCGGAT GCGACGACGA GGAACTGCGC
ACGTTCTTCG GGCACGGCAT GCTGCTCAAC GTCGTGGCCG CGATGAACCT GCAGGAGATC
AGCGACCGCT GGGCCCGGGA GATCTGCAGC TAG
 
Protein sequence
MSDHYLEVVT PRTTGGTGTR MSAEQRRAVV LAAAVEEFAL GGLTGTSTEA IASRAGISQP 
YLFRLFPTKK ELFLAAVRAT FTLTRERFET AAGDLVGADA LTAIGSAYDE LLTDRTYLLM
QMQSYASCGD PGIQEVTRQG FRDLWQTVER VSGCDDEELR TFFGHGMLLN VVAAMNLQEI
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