Gene Franean1_5173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5173 
Symbol 
ID5673507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6207961 
End bp6208725 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content72% 
IMG OID641244027 
Productchlorite dismutase 
Protein accessionYP_001509437 
Protein GI158316929 
COG category[S] Function unknown 
COG ID[COG3253] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000990081 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCACCA GCAGTGTCCC CGCCACCCCC CCCACCGGCG TCCCCCCCAC CGGCGCTTCC 
GGGCCTGCCG ACGGGGAGTC CACGAAGTCG GCCCGTGAGC TGAACGACGA GCTGCTCTAC
ACGGGCTGGT TCGTGTTCGC CGCCCGGCAG CCGCTGCCCG CCGACCGCGC GGGCATCACG
GCGGAGGCCG GCGAGCTGCT CGACGGCGCA CTGGCGAAGG ACGTCTACAC CCGTGGTATC
TACGAGGTCT CCGGCTACCG GGCTGACGCC GACGTGATGA TCTGGTGGAC CTCACCCAAC
CCGGACCTGC TGCAGCAGAC CTACCAGCGT TTCCGGCAGA CCGGCCTGGG GCGGTGCCTG
GAGCCGGTGT GGTCCGCGGT GGGTCTGCAC CGCCCGGCGG AGTTCAACCG GAACCACATC
CCGGCCTACG TGCGCCGGGA GGACCCGCGG GACTACATCT GCGTGTATCC GTTCAACCGG
TCGTTCGAGT GGTACCTGCT GCCCGACTAC GAGCGCCGCG GCCTGCTCGC CGAGCACGGG
ATGATGGGCC GCGAGTACGA GGACGTGCGG GCCAACACCG TGGCCGCGTT CGGCCTGGGC
GACTACGAGT GGCTCCTGGC GTTCGAGGCC GACGAGCTCC ACCGGATCGT CGACTGCATC
CGCCACCTGC GGGCGAGCGC GACGCGCCGC CACACCCGGC TGGAGACGCC GTTCTACAGC
GGCGCCCGCA AGCCGCTGCC GGACGTCGTC GCCGCCCTGC CGTAA
 
Protein sequence
MPTSSVPATP PTGVPPTGAS GPADGESTKS ARELNDELLY TGWFVFAARQ PLPADRAGIT 
AEAGELLDGA LAKDVYTRGI YEVSGYRADA DVMIWWTSPN PDLLQQTYQR FRQTGLGRCL
EPVWSAVGLH RPAEFNRNHI PAYVRREDPR DYICVYPFNR SFEWYLLPDY ERRGLLAEHG
MMGREYEDVR ANTVAAFGLG DYEWLLAFEA DELHRIVDCI RHLRASATRR HTRLETPFYS
GARKPLPDVV AALP