Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5173 |
Symbol | |
ID | 5673507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 6207961 |
End bp | 6208725 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641244027 |
Product | chlorite dismutase |
Protein accession | YP_001509437 |
Protein GI | 158316929 |
COG category | [S] Function unknown |
COG ID | [COG3253] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000990081 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCCACCA GCAGTGTCCC CGCCACCCCC CCCACCGGCG TCCCCCCCAC CGGCGCTTCC GGGCCTGCCG ACGGGGAGTC CACGAAGTCG GCCCGTGAGC TGAACGACGA GCTGCTCTAC ACGGGCTGGT TCGTGTTCGC CGCCCGGCAG CCGCTGCCCG CCGACCGCGC GGGCATCACG GCGGAGGCCG GCGAGCTGCT CGACGGCGCA CTGGCGAAGG ACGTCTACAC CCGTGGTATC TACGAGGTCT CCGGCTACCG GGCTGACGCC GACGTGATGA TCTGGTGGAC CTCACCCAAC CCGGACCTGC TGCAGCAGAC CTACCAGCGT TTCCGGCAGA CCGGCCTGGG GCGGTGCCTG GAGCCGGTGT GGTCCGCGGT GGGTCTGCAC CGCCCGGCGG AGTTCAACCG GAACCACATC CCGGCCTACG TGCGCCGGGA GGACCCGCGG GACTACATCT GCGTGTATCC GTTCAACCGG TCGTTCGAGT GGTACCTGCT GCCCGACTAC GAGCGCCGCG GCCTGCTCGC CGAGCACGGG ATGATGGGCC GCGAGTACGA GGACGTGCGG GCCAACACCG TGGCCGCGTT CGGCCTGGGC GACTACGAGT GGCTCCTGGC GTTCGAGGCC GACGAGCTCC ACCGGATCGT CGACTGCATC CGCCACCTGC GGGCGAGCGC GACGCGCCGC CACACCCGGC TGGAGACGCC GTTCTACAGC GGCGCCCGCA AGCCGCTGCC GGACGTCGTC GCCGCCCTGC CGTAA
|
Protein sequence | MPTSSVPATP PTGVPPTGAS GPADGESTKS ARELNDELLY TGWFVFAARQ PLPADRAGIT AEAGELLDGA LAKDVYTRGI YEVSGYRADA DVMIWWTSPN PDLLQQTYQR FRQTGLGRCL EPVWSAVGLH RPAEFNRNHI PAYVRREDPR DYICVYPFNR SFEWYLLPDY ERRGLLAEHG MMGREYEDVR ANTVAAFGLG DYEWLLAFEA DELHRIVDCI RHLRASATRR HTRLETPFYS GARKPLPDVV AALP
|
| |