| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4922 |
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| Symbol | |
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| ID | 5673262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5908905 |
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| End bp | 5910461 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641243777 |
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| Product | cysteine desulfurase |
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| Protein accession | YP_001509193 |
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| Protein GI | 158316685 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00686408 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCCCTTT CGTATGCCAC CACGTCTCCC GACGTTGATC GGGAAGGGCC CGCCGTCGGC
GCGCTGCTCG ACGTGGTGGG GGCCGGCATC CCCGTTCCGC TCGCCGACGG ACGCGAGGTC
CCGTACGCCA ATCTCGACCA GGCCGCCAGC GCCCCCTGCC TGCGCGGGGT CGCCGAGCAC
GTCGAGCGCG TCCTGCCGTA CTCGGCGAGC GTGCACCGCG GAACCGGCTA CTCCTCCGCG
GTCTGCACCG CGCTCTACGA GGGGGCCCGC GCCGCCGTGC GCACGTTCGT CGGCGGCCGC
CCGGACGACG TCGTGATCTT CACCCGGAAC ACCACCGACT CGGTGAACCT GCTCGCCCGC
TGCCTCCCGC CGCAGCCGCC CGACCCGCCG CAGCCGCCCG ACCCGGCGCG GACGTCCGAC
CCGGGCCACG CCGAGCCCGG CGGGGTTGTC GTGTTCGACC TGGAGCATCA CGCGAACCTT
CTCCCGTGGC GGTCCCGGCC GGGCTGCCGG TGGGTGCCCG CCGCGCCCAC CCGCGCCGAC
ACGCTGCGCG CGCTCGCCAC CGCCCTGGAC ACGGCACCGA CCTCGCTCGT CGCGGTGACC
GGCGCGTCCA ACGTCACCGG CGAGGTGCCG CCGCTCGCCG AGATCGTCCG GCTGGCGCGC
GCGGCCGGCG CGCGGGTCTT CGTGGACGGC GCCCAGCTCG TCCCGCACCG TCGGGTCGAC
ATGGCCGCGC TCGGCATCGA CTACCTCGCG TTCTCCGGGC ACAAGCTGTA CGCGCCGTTC
GGCGCCGGCG TGCTCGTCGG ACGTCCGGAC TGGCTGGCGG CGGCCCCGCC CTATCTCGCC
GGCGGGGGCG CCGTGCGTGA GGTGACCAAC TCCGCCGTGG CCTGGGCGGA CGGCCCGGCC
CGGCACGAGG CCGGCAGCCC CAACCTCCTC GGCGCGACGG CGATCGCGGC CGCCTGCCGG
CTGCTGGGCG CGCTCGCCCC CCGCGACCTG CACCAGCACG AGGACCTGCT GCGCCGCCGC
CTGGTGGACG GGCTGCGCGC GATCGAGGGA GTCACCATCC ACTCCCTGTG GGCCGACGGA
GACGATCCCG CCGCTGGCGA GGCCGCCGGA GGCGAGGGCC CGGACGGGAT CCTGGCCACG
GGGCCCGTCG GGGTCGTCAC CTTCTCGGTC GCCGGGCGCG ATCCCGGGTT CGTCGCCGCC
GTCCTCTCCG CCGAGCACGG CGTCGGGGTA CGCGCCGGAC GCTTCTGCGC GCATCCGCTG
CTGGGGCGGC TCGGAGCCGA GGGCGGCGCG ATCCGCGCGA GTGTCGGCAT CAGCTCGACG
AGTGCCGACG TCGACAGGCT GCTGGCAGGG CTGGCGGAGC TCGTCGGCCG CGGGCCGCGC
CAGCAGTACC GCGACCTGGG CGACGGAGGC TGGGCTCCGG CATCGGACGG TCGCGCGCTG
CCGCCCTGGG TCGCCGAGCA CATGGCGGCC GGTCACGTCC GCGGTCGTGT GCCCGCGCCG
GGCCACGCGC ACGACAGCGC CGGCCTGCCC GCGTACTCCA GCCCCTGCGG GACCTGA
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| Protein sequence | MSLSYATTSP DVDREGPAVG ALLDVVGAGI PVPLADGREV PYANLDQAAS APCLRGVAEH
VERVLPYSAS VHRGTGYSSA VCTALYEGAR AAVRTFVGGR PDDVVIFTRN TTDSVNLLAR
CLPPQPPDPP QPPDPARTSD PGHAEPGGVV VFDLEHHANL LPWRSRPGCR WVPAAPTRAD
TLRALATALD TAPTSLVAVT GASNVTGEVP PLAEIVRLAR AAGARVFVDG AQLVPHRRVD
MAALGIDYLA FSGHKLYAPF GAGVLVGRPD WLAAAPPYLA GGGAVREVTN SAVAWADGPA
RHEAGSPNLL GATAIAAACR LLGALAPRDL HQHEDLLRRR LVDGLRAIEG VTIHSLWADG
DDPAAGEAAG GEGPDGILAT GPVGVVTFSV AGRDPGFVAA VLSAEHGVGV RAGRFCAHPL
LGRLGAEGGA IRASVGISST SADVDRLLAG LAELVGRGPR QQYRDLGDGG WAPASDGRAL
PPWVAEHMAA GHVRGRVPAP GHAHDSAGLP AYSSPCGT
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