Gene Franean1_4905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4905 
Symbol 
ID5673245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5891280 
End bp5891702 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content76% 
IMG OID641243760 
Producthypothetical protein 
Protein accessionYP_001509176 
Protein GI158316668 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.159227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00546227 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCACGA CCGGACCGTG GGCCTCTCGC GTCCGGCGGC GGCTGGTGCT GGCGGGTGCC 
GGCTGCTGCC TGCTCGCCGG GGTCGGCTAC CTGGCCGGCA CCGACCCGCA TGACCCGTCG
TCCGTGATGC CGCGGTGCCC GGTCCGGGCG GTCACCGGGC TGGACTGCCC GGCCTGCGGT
GGGCTGCGCC TCACCTACGA CCTGCTGCAC GGCATGCCGG CCGCGGCCGC CCGCGACAAC
CTGTTCCTCC TGGTGTGCTC CCCGCTGCTG GTCGCCCTCG TTGTCCGGCA GGCCCGCGCG
TTCGACCGTG GTCACCCCGC GCCGCTGCCA CGTCCGCTGG CGTACGGGCT CGCCGGCGCG
GCGCTGGCCT GGATGGCGGT GCGCAACCTG CCCGGATGGC CGCTCAGCCC GACCTCGGTC
TGA
 
Protein sequence
MATTGPWASR VRRRLVLAGA GCCLLAGVGY LAGTDPHDPS SVMPRCPVRA VTGLDCPACG 
GLRLTYDLLH GMPAAAARDN LFLLVCSPLL VALVVRQARA FDRGHPAPLP RPLAYGLAGA
ALAWMAVRNL PGWPLSPTSV