Gene Franean1_4893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4893 
Symbol 
ID5673233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5872160 
End bp5872939 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content74% 
IMG OID641243748 
Producthypothetical protein 
Protein accessionYP_001509164 
Protein GI158316656 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0379402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0824427 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCTCT CCGCGGCCGG TGCCGACCCT GGGCGGCGTG CGCCGCTGGA CCCGCTCGAC 
AGCGGCGGGC TGGGCGTGAG CGAGGCGTTG GCGCTCCTGC GCACCGGCGA GCTGGAGATC
ACCGGGCGGC TGGTCGACGC CAGCAACGCC ACGCTGCTGT GCGAGATCCG GGCCGACGAG
CTCTGCGGGC GGTGCGTGTA CAAGCCGGTG CGCGGCGAAC GCGCCCTGTG GGACTTCCCG
GACGGGACGC TGGCGGCCCG TGAGCTGGCC GCCTATGAGG TCGCCGAGGC GATGGACCCG
GGCATCGTCC CACCGACCGT CATGCGGGAC GGCCCGTTCG GCGCGGGGAT GGTCCAGCTC
TGGATCGACG TCGACACGAC CGTCGACCTC GTCGCGCTGA CCCGGTCGGA CGACCCGCAG
CTGCGGCGTA TCGCGCTGTT CGACGCCGTC ATCAACAACG CCGACCGGAA GGGCGGCCAC
CTGCTCCCGG CGCCGTCCGG GCGGGTGCAC GGCATTGACC ACGGCGTGAC GTTCCACACG
GACGACAAGC TGCGCACGCT GCTGTGGACC TGGCGGGGCC GGCGGCTGGA CGCGGCGGAG
ACCACGCTCC TGCAGGGCGT GGGCGACGCG CTGGGCGCGG ATCTGGGGGA GCGGCTCGAG
CCGCTGCTCA CCACGACCGA GCTACGGGCA CTGGGAGCCC GGGTCGACCG GCTCCTGGCC
GAGGGCCGTT TCCCGTTGCC CTCCGGGGAC TGGCCGGCCA TTCCCTGGCC GCCGTTCTGA
 
Protein sequence
MSLSAAGADP GRRAPLDPLD SGGLGVSEAL ALLRTGELEI TGRLVDASNA TLLCEIRADE 
LCGRCVYKPV RGERALWDFP DGTLAARELA AYEVAEAMDP GIVPPTVMRD GPFGAGMVQL
WIDVDTTVDL VALTRSDDPQ LRRIALFDAV INNADRKGGH LLPAPSGRVH GIDHGVTFHT
DDKLRTLLWT WRGRRLDAAE TTLLQGVGDA LGADLGERLE PLLTTTELRA LGARVDRLLA
EGRFPLPSGD WPAIPWPPF