Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4893 |
Symbol | |
ID | 5673233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 5872160 |
End bp | 5872939 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641243748 |
Product | hypothetical protein |
Protein accession | YP_001509164 |
Protein GI | 158316656 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0379402 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0824427 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCTCT CCGCGGCCGG TGCCGACCCT GGGCGGCGTG CGCCGCTGGA CCCGCTCGAC AGCGGCGGGC TGGGCGTGAG CGAGGCGTTG GCGCTCCTGC GCACCGGCGA GCTGGAGATC ACCGGGCGGC TGGTCGACGC CAGCAACGCC ACGCTGCTGT GCGAGATCCG GGCCGACGAG CTCTGCGGGC GGTGCGTGTA CAAGCCGGTG CGCGGCGAAC GCGCCCTGTG GGACTTCCCG GACGGGACGC TGGCGGCCCG TGAGCTGGCC GCCTATGAGG TCGCCGAGGC GATGGACCCG GGCATCGTCC CACCGACCGT CATGCGGGAC GGCCCGTTCG GCGCGGGGAT GGTCCAGCTC TGGATCGACG TCGACACGAC CGTCGACCTC GTCGCGCTGA CCCGGTCGGA CGACCCGCAG CTGCGGCGTA TCGCGCTGTT CGACGCCGTC ATCAACAACG CCGACCGGAA GGGCGGCCAC CTGCTCCCGG CGCCGTCCGG GCGGGTGCAC GGCATTGACC ACGGCGTGAC GTTCCACACG GACGACAAGC TGCGCACGCT GCTGTGGACC TGGCGGGGCC GGCGGCTGGA CGCGGCGGAG ACCACGCTCC TGCAGGGCGT GGGCGACGCG CTGGGCGCGG ATCTGGGGGA GCGGCTCGAG CCGCTGCTCA CCACGACCGA GCTACGGGCA CTGGGAGCCC GGGTCGACCG GCTCCTGGCC GAGGGCCGTT TCCCGTTGCC CTCCGGGGAC TGGCCGGCCA TTCCCTGGCC GCCGTTCTGA
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Protein sequence | MSLSAAGADP GRRAPLDPLD SGGLGVSEAL ALLRTGELEI TGRLVDASNA TLLCEIRADE LCGRCVYKPV RGERALWDFP DGTLAARELA AYEVAEAMDP GIVPPTVMRD GPFGAGMVQL WIDVDTTVDL VALTRSDDPQ LRRIALFDAV INNADRKGGH LLPAPSGRVH GIDHGVTFHT DDKLRTLLWT WRGRRLDAAE TTLLQGVGDA LGADLGERLE PLLTTTELRA LGARVDRLLA EGRFPLPSGD WPAIPWPPF
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