| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4892 |
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| Symbol | |
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| ID | 5673232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5870770 |
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| End bp | 5872104 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641243747 |
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| Product | cysteinyl-tRNA synthetase |
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| Protein accession | YP_001509163 |
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| Protein GI | 158316655 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0215] Cysteinyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase
[TIGR03447] cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00699487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0480407 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCTGCT CGTCGCCGGC CTGCCCGGCT TGTCCCGCGG CCGGCCCAGC CCCGGTTACC
CTGACACGCA TGCAGGCGTG GCCCTTTCCC CAGCTCCCCA AGCTTCCCGG ACAGGGTCGC
GACCTCCGCG TTCTCGACAC GGCGCACGGC GGAGTGCGGA CTCTGGACCT CGGGCCGACG
GTCCGGCTCT ACGCCTGCGG GATCACCCCG TATGACGCCA CCCACCTCGG GCACGCCTTC
ACGTACCTCA CCTACGACCT CGTCCAGCGC GTGCTGCGGG ACGCCGGCCA CGAGGTGCGG
TACGTGCAGA ACGTCACCGA CGTCGACGAT CCGCTGCTCG AGCGGGCCAC CCGCGACGGC
ATCGACTGGC GCGACCTCGC CCGCCGCGAG ATCGACCTGT TCCGGGCCGA CATGACGGCG
CTGCGCATCC TGCCCCCCGA CCACTACGTC GGCGTCGTCG AGGCCGTCGG GCTCATCGTC
GACATGGTCT CCCAGCTCGT CGAGCGCGGC GCCGCGTACT CCGTCGACGG CGATCTCTAC
TTCTCCGTCG CCGCGGCGCC GGACTTCGGC CAGGTGGCCC ACCTCGACCC CGCGCAGATG
CTGGTGTCCT GCGCCGAGCA CGGCGGTGAT CCCGGCCGGC CGGGCAAGAA GGACCCGCTC
GACCCGCTGC TGTGGCGCGC GGAGCGGCCG GGGGAGCCGT CCTGGCCGTC GCCGTTCGGC
CCGGGGCGGC CGGGCTGGCA CGTGGAGTGC TCCGCGATCG CCCGGCACTA CCTCGGCGCC
ACGATCGACA TCCAGGGCGG CGGGAGCGAT CTCGCCTTCC CACACCACGA GTGCAGCGCC
GCGCACGCCG AGGTCGCGAA CGGCGCCCGG CCGTTCGCCC GCGCCTACGT CCACACCGCG
CTGGTCAGCC TGGACGGCCA CAAGATGTCG AAGTCGCGGG GGAACCTCGA GTTCGTCTCG
AGGCTGCTCG CGCGCGGAGC GGACCCGGCC GCGATCAGGC TCGCCCTGTT GCAGCATCAT
CACACCGTGG AGTGGGAGTG GACCGCGGCC GCCATGCCGG CGGCAGCCGA GCGGCTCGAC
CGGTGGCGCG CCGCCGTCGC GCTGCCGTCC GGCCCAGACT TCCGGCCGGT GCTGGCCGAG
GTCCGGGACC GGCTCGCCGA CGACCTCGAC GCGCCTGGAG CGCTCGCCGC GGTCGACGCG
TGGGCGGCGG CCGCACTGGC CGCTGGCAGC GGCGGCAGCG GCGAGGCGGA CGACCAGGCG
CCGGCCACCG TCCGCGACAC CGTCGACTCA CTGCTCGGTG TCGACCTTGG GCCTGTCCTA
CCGAGAGGAA CCTAG
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| Protein sequence | MPCSSPACPA CPAAGPAPVT LTRMQAWPFP QLPKLPGQGR DLRVLDTAHG GVRTLDLGPT
VRLYACGITP YDATHLGHAF TYLTYDLVQR VLRDAGHEVR YVQNVTDVDD PLLERATRDG
IDWRDLARRE IDLFRADMTA LRILPPDHYV GVVEAVGLIV DMVSQLVERG AAYSVDGDLY
FSVAAAPDFG QVAHLDPAQM LVSCAEHGGD PGRPGKKDPL DPLLWRAERP GEPSWPSPFG
PGRPGWHVEC SAIARHYLGA TIDIQGGGSD LAFPHHECSA AHAEVANGAR PFARAYVHTA
LVSLDGHKMS KSRGNLEFVS RLLARGADPA AIRLALLQHH HTVEWEWTAA AMPAAAERLD
RWRAAVALPS GPDFRPVLAE VRDRLADDLD APGALAAVDA WAAAALAAGS GGSGEADDQA
PATVRDTVDS LLGVDLGPVL PRGT
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