| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4843 |
|---|
| Symbol | |
|---|
| ID | 5673184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 5809569 |
|---|
| End bp | 5810081 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641243699 |
|---|
| Product | flavin reductase domain-containing protein |
|---|
| Protein accession | YP_001509115 |
|---|
| Protein GI | 158316607 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0696013 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAACG CGCGGCTGAC CGCCATCGAC GCCACTGCGG TCGACCAACG CCTGCTGCGT
ACGACGTTCG GCTGTTTCCC CAGCGGGGTC ACCGCTGTCT GTGGGCTCGC CGGCCGAGAG
CCGGTCGGGA TGGCGGTGAG TTCGTTCACC TCGGTCTCCC TGGACCCGCC GCTGGTCTCG
GTGTGCGTGG CGAACTCGTC CACCACCTGG CCCCGGCTGC GGGCGCTTGG CCGGCTGGGC
GTCAGCGTCC TCGGGGAGAC CCACGACCTG GCGGCGCGTC AGCTCTCCGC CCGCGACGGT
GACCGGTTCG CCGGCATGGA GCTGACCTCG ACGTCCGGTG GCGCGCTGTT CGTCGCCGGG
TCCGCGGCGA CCCTCGAGTG CGAGATTGTC AGCGAGGTGC CCGCAGGCGA CCATCTGATC
GCGCTGTTGC GGATCCACGC CCTGGATTCC GACGCGAGCG TCACCCCGCT GGTCTTCCAC
GGCAGCCGGT TCCGGCAGCT GGCCAGCATC TGA
|
|---|
| Protein sequence | MVNARLTAID ATAVDQRLLR TTFGCFPSGV TAVCGLAGRE PVGMAVSSFT SVSLDPPLVS
VCVANSSTTW PRLRALGRLG VSVLGETHDL AARQLSARDG DRFAGMELTS TSGGALFVAG
SAATLECEIV SEVPAGDHLI ALLRIHALDS DASVTPLVFH GSRFRQLASI
|
|---|
| |