Gene Franean1_4835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4835 
Symbol 
ID5673176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5777291 
End bp5778097 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content73% 
IMG OID641243691 
ProductN-acetyltransferase 
Protein accessionYP_001509107 
Protein GI158316599 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2162] Arylamine N-acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.452247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00710998 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGTTTGACG TCGAGGCGTA CCTGAAGGCG CTCGACCACC GTGGCCCGGC CGACGCGAGC 
CCTGAGACGC TGCGCCGCCT GCACCACGCC CACCTGCGGA CCGTGCCCTA CGACAGCGAG
CTGAACTCCA CCCGCGGCAC GGACCTGTGG AAGGGCGTCG ACATCGACGC CGACGCCGTG
TTCGACGCGG TGGTCCTCGG CGGCCGTGGC GGGGTGTGTT ACGAGCTCAA CGGCCTGTTC
CGGCGCCTGC TGGCCGAGCT CGGATTCGAG ACCGGCGTGT ACGCGGCGGC CATCCGGCAG
GTCGACGGAT CCTTCGGGCC GGACCTGGAG CACATCTTCA CCTTCGTCCG CCTGGACGAC
GAGGTGCTCC TCGTCGACGT CGGCTTCGTG GGGCCGTCCT ACCTGGAGCC GCTGCTGCTC
GGCACGCAGG AACAGCGGCA GTTCGGCACG TCCTTCCGCA TCGTCGGCAG CGAGGGCTAC
CACGTCCTGC AGCGGCGCGG TCAGCGCGGC GACTGGGCCG CCGTGTACCG GTTCCGGCCG
GTACCGCGCG ACCTCGCTGA CTGGTCGGCC CCGTCAGAGG AGCTCACCGC CTTCGCCCGG
GCGCTGGCGG GAGCGGGGAC GCTCGTGCGC GGCCGGGCGA CCCTCTCCGG GCAGCGGATC
CTGATCGGCA AGCGGCTGGT GACCGTCGAC AACGGGCACG AGGCCATGCG GGTGCTCACC
GACCCGGCCG AGCACGCCCG CGTGCTCGCC GACATCCTCC GCCGCCCGCC GGCACCCGCC
ACCGCGCCCA CCGGCGACGC CCGGTGA
 
Protein sequence
MFDVEAYLKA LDHRGPADAS PETLRRLHHA HLRTVPYDSE LNSTRGTDLW KGVDIDADAV 
FDAVVLGGRG GVCYELNGLF RRLLAELGFE TGVYAAAIRQ VDGSFGPDLE HIFTFVRLDD
EVLLVDVGFV GPSYLEPLLL GTQEQRQFGT SFRIVGSEGY HVLQRRGQRG DWAAVYRFRP
VPRDLADWSA PSEELTAFAR ALAGAGTLVR GRATLSGQRI LIGKRLVTVD NGHEAMRVLT
DPAEHARVLA DILRRPPAPA TAPTGDAR