Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4778 |
Symbol | |
ID | 5673119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 5704335 |
End bp | 5705342 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641243634 |
Product | 5,10-methylenetetrahydromethanopterin reductase |
Protein accession | YP_001509050 |
Protein GI | 158316542 |
COG category | [C] Energy production and conversion |
COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACG CGAACGATTT TGAGTTATCG TGCGGGCTCC CGCCGGGCCC GGACTTCGCC GACCTCGCCG TGCTCGCCGA AGAGCTCGGG TACGCGCGGG TGTGGATCTT CGATTCGGCG CCGCTGTGGG AGGACCCGTT CGCGCACCTG GCGCTCGCCG CCACCCGGAC GACCCGGATC GGTCTCGCCA CCGCCGTCCT GATCCCGACC CAGCGGTCCG TCATGACGAT GGCCTCCGGC ATCGCCACCA TCGCCCGGCT GTCCGGCGGC CGCTTCCGGG CCTGCTTCGG TACCGGCTAC ACGGCACGCA TGACGATCGG GCAGCGTGCG ATGCCGCTGG ACGCGCTGTT CGACTATGCC GCGTCGGTCC GCAAGCTGCT TGCCGGCGAG ACGATCGTGC TCGACGGCGA GGCGGCCCGG ATGCTGCACT GGCCCGGCCT GACCGCCGCC CGGCCGGTCC AGGTGCCGCT GTGGCTCAGC GTCCTCGGCC CGCGCGGCAA CAAGCGCGCC CCCGAGGTGG CTGACGGCAC GATCGGGCCG CCCCACCCGA CGCTGCCGAC CGCGACGATG GTCTCGGGCA CCGTGCTGGA CCCCGGCGAG GACCCGAGCT CCAGCCGCGT ACGGGAGGCG ATCGGCCCGT GGCAGGTCGT CGGCTGGCAC ACCACCTATG CCGTCCGTGG GGCGGCCGGG GTGGACGCCC TGCCCGGTGG CTCGCAGTGG CGGAAGGCCC TCGAGGGCCT GGCCTCCGAG GAGGAGCGCC ACCTGCTCAC CTTCGAGGGC CATGTCACCC ACCTCTCCGA GCGTGACCGG CCCCTGCTGG AGCACATCGA CGTCGACACC ATGGCCGGCG ATGTCTACGT CGGCACCCTG GTCGGTGATT CCGTCAGCGT CGGACGGAAG CTCGGCAGGC TCGCCGAGGC GGGGTTCCGC GAGGTCATGT ACACGCCCGC TGGCCCGGAC GTCGCCCGCG AGCTGCGCGC CTTCGCCGCC GCCAGCCCTT CGGGATAG
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Protein sequence | MTDANDFELS CGLPPGPDFA DLAVLAEELG YARVWIFDSA PLWEDPFAHL ALAATRTTRI GLATAVLIPT QRSVMTMASG IATIARLSGG RFRACFGTGY TARMTIGQRA MPLDALFDYA ASVRKLLAGE TIVLDGEAAR MLHWPGLTAA RPVQVPLWLS VLGPRGNKRA PEVADGTIGP PHPTLPTATM VSGTVLDPGE DPSSSRVREA IGPWQVVGWH TTYAVRGAAG VDALPGGSQW RKALEGLASE EERHLLTFEG HVTHLSERDR PLLEHIDVDT MAGDVYVGTL VGDSVSVGRK LGRLAEAGFR EVMYTPAGPD VARELRAFAA ASPSG
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