Gene Franean1_4769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4769 
Symbol 
ID5673111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5695273 
End bp5695716 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content69% 
IMG OID641243626 
ProductHxlR family transcriptional regulator 
Protein accessionYP_001509042 
Protein GI158316534 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAACAC TGACGGCAGC CCAGAAGCGG GCACAGGCGC AGGCAGACTA CGACGCGTTC 
CTGGCACGCT GCCCCAGCCG CCAGCTACTC GACCGGATCT CCGACAAGTG GGTGACGCTG
GTCCTGGCGG CTCTCGGCAG CGACGGCCCG CACGCCCCCG GCAGCAACCA TGTCGGCGAG
CCGCGAGCGA TGCGCTACTC GGAGTTGGCC CGCCGGCTGG CCGGGGTCAG CCAGAAGATG
CTCACCCAGA CACTGCGTTC CCTCGAGCGC GACGGCCTGG TCACCCGCAC CGTGACGGCG
ACCGTGCCGG TCACCGTCAC CTACGAGCTG ACCGACCTGG GTCTCTCGCT CCACCACATG
ATGCACGGCA TCAAGGATTG GGCCGAGGCA CACATGGACG AGGTGCTCGC CAACCGCGAG
GAGTACGACA CCCGCGTCGC CTGA
 
Protein sequence
MPTLTAAQKR AQAQADYDAF LARCPSRQLL DRISDKWVTL VLAALGSDGP HAPGSNHVGE 
PRAMRYSELA RRLAGVSQKM LTQTLRSLER DGLVTRTVTA TVPVTVTYEL TDLGLSLHHM
MHGIKDWAEA HMDEVLANRE EYDTRVA