| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4740 |
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| Symbol | |
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| ID | 5673082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5660746 |
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| End bp | 5661603 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641243597 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001509013 |
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| Protein GI | 158316505 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCAGGA ATGGCACCCG GGCCGCCGGG ACGGTGGGCA TCGTGACCGG TGCCGGTCGC
GGGATGGGCC TGGCCTGCGC GCAGCGCCTC GACGGCACGG TCGACGCGTT GCTGCTCGTC
GACCGGGACG AGTCGGTGAC CGCGCTGGCG AAGCGGTGGC CGGCGAGCAC GACCACCGTC
GAGGCGTTCG TCCTCGACGT CACCGACCGG GAGGGACTGG ACCGGCTCGC GGCACGGGCC
GGCGAGCTCG GCACGCTGCG CGCCGTCGCG CACGCCGCGG GCATCTCACC GACGATGGCC
GACTGGCGCC GCATCTTCGC CGTCGACCTC GTCGGGACGG CGCTGCTCGC GGCGGCCCTG
CGCCCGCTCA CCACCGCCGG GACGGCGCTG GTGTGCTTCG CCTCCATGGC GCCGTACCTG
CAGATCAGCG AGGCCAACCC GGCCGCCGAC GCCGTGCTGG ACGACCCGCT CGACGAGAAC
TTCCTCGACC GCCTGCACGA GGCCCTCGGG CCCCTCGTCG AGGACCCCGG CATGGCCTAC
TCGTGGGCCA AGCGCGGGGT GCAGCGCTTC GCCCGCCAGG AGGCGGTGCG GGTCGGTCCG
CTCGGCGGGC GCGTCTGCTC CCTCTCCCCG GGGATCATCG ACACTCCGCA GGGCCGGCAG
GAGGCCGAGA CCCACACGAT CATGCAGACC CTGGTGGACC AGACTCCGCT CGGCCGCATC
GGGCAGGCGC AGGACGTCGC CGATGTCGTC GCCTTCCTGC TGTCCGACAG CGCCCGCTTC
GTGACCGGCG TCGACATCCT CGTGGACGGC GGCATCTGCG CCGCGCTGAG CGGGTCGGCG
GCCGCCGCCA CCCAGTAG
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| Protein sequence | MTRNGTRAAG TVGIVTGAGR GMGLACAQRL DGTVDALLLV DRDESVTALA KRWPASTTTV
EAFVLDVTDR EGLDRLAARA GELGTLRAVA HAAGISPTMA DWRRIFAVDL VGTALLAAAL
RPLTTAGTAL VCFASMAPYL QISEANPAAD AVLDDPLDEN FLDRLHEALG PLVEDPGMAY
SWAKRGVQRF ARQEAVRVGP LGGRVCSLSP GIIDTPQGRQ EAETHTIMQT LVDQTPLGRI
GQAQDVADVV AFLLSDSARF VTGVDILVDG GICAALSGSA AAATQ
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