| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4718 |
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| Symbol | |
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| ID | 5673060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5632068 |
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| End bp | 5633762 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641243575 |
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| Product | 3-ketosteroid-delta-1-dehydrogenase |
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| Protein accession | YP_001508991 |
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| Protein GI | 158316483 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.329428 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGAAGT CGGATGCCAG CTACGACCAT GCCGTTGACG TCATTGTCGT GGGATCGGGC
GGTGGTCTGT GCGGCGCCGT GGCCGCGGCG GCGAGCGGCC TGGACACGCT GGTGATCGAG
AAGCAGCCGA TGATCGGCGG GTCCACGGCC ATGTCAGGCG GCGTGCTGTG GCTGCCGGAC
AACCCGCTCA TGCAGGCCGA CGACGTTCCC GACTCCCTTG AGGACGCGCT GGCGTACTTC
GACTCCGTTG TCGGAGACGT CGGTCCCGCG TCGTCGCACC AGCGTCGGGT CGCCTACGTC
ACCGAAGGCG CCACCATGGT CCGCTTCCTG CAGAACCTGG GCATGCGGTT CGAGCGGTGC
GAGGGCTACA GCGACTACTA CGCCGGGGTG GCGGGTATCC GCGGCGGCAG CGCCCGCGGG
CGCTCCCTCG AACCCGCGGT GACCGACGGC AAACAGCTCG GGCCGTGGTT CGACAAGCTG
ATGCCGGGCA TGACGATCGC GCTCGGGATC GTCGTGATGA CACGCGAGGC GTCCGGACTG
CAGATGGTCA AGCGGCGACC GAAAGCCATG CGCACCGCCG CCCGCGTCGG GGTGCGCACG
GCCATCGGCC GGCTACGGCG CCAGACCCGC CTGGCCAACG GCGGGGCACT GATCGCCCAG
ACCCTGACGG CCGCACTCGC CGCCGGGGCG TCGATTTGGA CGAACACCGG ACTGGTCGAC
CTGATCACCG AGGACGGCCG GGTCGTCGGC GTCGTCGCCG ACCGGGACGG CCACACCATC
CGGATCCGCG CCCGCCACGC CGTGCTGTTG AGCTCAGGTG GTTTCGGCTG CAACCCCGAG
ATGCGCAAGC GGTACTCGAA GCAGCCGAAC GACGGAACGT GGACCAGTGC CAACCCGGGT
GACACCGGCG AGGCGATCGA GGCCGCCATG CGCCTGGGCG CCGCCGTCGA CTTCATGGAC
GAGGCCCTGT GGATCCCGGC CTCCATCCAG CCCGGCGGAC GTCCGAGCAT GCACAACGGC
GAACGATGCA AACCAGGTTC GATCATCGTC GACCGGGCCG GCCGCCGGTA CTTCAACGAA
GCGGTCTCCT ACATGGAAGC CGGCCGGCAG ATGTACGCCC ACAACGTCGA CGGTGAATCC
ATCCCGAGCT GGCTCGTCAT GGACTCCCGC CACCGCGCCC GCTACCTGTT CGCGTTCCGT
CCCAACACTC CCGAGGAATG GCTCACCAGC GGCTACATGA AGAAAGCCGA CACGCTCGAC
GAGCTCGCGC GGGCGTGCGG CATCGACCCC GCGGGGCTGG CCACCACGGT GGCCCGGTTC
AACACGTTCG CGGAGCAGGG CACGGACCCC GACTTCCACC GCGGCGAAGG CGCTCATGAA
AAGTACCAGG GCGACTACGG CAACAAACCG AACCCGTCGC TCGCGCCCGT CGAGAAGGCA
CCATTCTACG CCGTCGAACT CTATCCAGGC GACGTCGGCA CCAGCGGCGG TCTCCTGTGC
GACGAACATG CTCGTGTGCT CGACACCAAC CACGACCCGA TCCCCGGCCT CTACGCCGCC
GGGAACTGCA CCGCCTCGGT GATGGGCCGC ACCTATCTCG GTGCGGGCGC CAGCATCGGC
AACAGCTTCG TGTTCTCCTA CATCGGCATG AAACACGCCG CACACGCCGC CTCCGGGGAC
CGAGCGGTCA CGTGA
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| Protein sequence | MSKSDASYDH AVDVIVVGSG GGLCGAVAAA ASGLDTLVIE KQPMIGGSTA MSGGVLWLPD
NPLMQADDVP DSLEDALAYF DSVVGDVGPA SSHQRRVAYV TEGATMVRFL QNLGMRFERC
EGYSDYYAGV AGIRGGSARG RSLEPAVTDG KQLGPWFDKL MPGMTIALGI VVMTREASGL
QMVKRRPKAM RTAARVGVRT AIGRLRRQTR LANGGALIAQ TLTAALAAGA SIWTNTGLVD
LITEDGRVVG VVADRDGHTI RIRARHAVLL SSGGFGCNPE MRKRYSKQPN DGTWTSANPG
DTGEAIEAAM RLGAAVDFMD EALWIPASIQ PGGRPSMHNG ERCKPGSIIV DRAGRRYFNE
AVSYMEAGRQ MYAHNVDGES IPSWLVMDSR HRARYLFAFR PNTPEEWLTS GYMKKADTLD
ELARACGIDP AGLATTVARF NTFAEQGTDP DFHRGEGAHE KYQGDYGNKP NPSLAPVEKA
PFYAVELYPG DVGTSGGLLC DEHARVLDTN HDPIPGLYAA GNCTASVMGR TYLGAGASIG
NSFVFSYIGM KHAAHAASGD RAVT
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