| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4703 |
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| Symbol | |
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| ID | 5673045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5618508 |
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| End bp | 5619728 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641243560 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001508976 |
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| Protein GI | 158316468 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00871383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGGATC AGCTCAGGTA CGACCTGCTG GCGGGCGTAA AGGTGGTCGA GGTGGCGGCG
TGGCTGTTCG CGCCGTCGTG TGGGGCGATC CTCGCTGACT GGGGCGCCGA CGTCATCAAG
ATCGAGCCGA CGCGGAACGG CGGTGATCCT TATCGGGGGT TCTTCCACAC CGGCGCGGTG
AACCCGACGA TCGAGCTCGC CAACCGGGGC AAACGCAGCG CGGCCGTCGA CCTGTCGACA
CCCGCCGGTC ACGACGTACT GTTACAGCTG GTTGCGGACG CTGACGTGTT CGTCACCAAC
CTGCTGCCCG ATCCGCGGGG ACGGCTCGGC GTCGAGATCG CCGACATCCG CGGGGCCAAT
CCCTCGATCA TCTACGTCCG GGCCAGCGGC TACGGCCCTC GTGGCTCGGA TGCCGAGACA
CCCGGCTTCG ACGCCGCGGT GGCGTGGGCC CGCGTCGGCG TCGCCCAGTT CCTCACCCCG
CCGGACGCGC GCCAACCGAT CCATCCGCCG GGCGGCATCG GTGACTGCGT CGGGGGGCTC
GGCGGGGCCG GCGCTGTCGC CGCCGCCCTG TTCAAGCGGG AGCGCACGGG CGTCCCATCG
GAGATCGACG TCTCGCTGCT CGCCAGCGGC ATGTGGATGA ACGCCACCGT CCTGATGACG
GAGGCCAACG CCGGGCCGGA GGGCTCGCTG ATGCAGCGGG TCGACCGCCG GACGGTCCGC
AACCCGCTGT CCAACAGCTA CCAGACAAAG GACGGCCGCT GGCTGTCGAT GGTCGTCATC
CAACCAGACC CCCACTGGCG CAGCTTCTGC GAGCACATCG GCCGGCCAGA ACTGGCCGAC
GACCCGCGTT TCGTGGACTT CCACGCTCGC ATGACGAACA ACACCGAGCT TGTCGGCCTG
CTCGACGAGG TATTCGCGTC CCGCGCCATG GCCGAGTGGC GCGAGGCGTT GCGCACGTTC
TCCGGGGTGT GGGACGTGCT CCAGACGCCT GCCGAGGTCG TGCACGACCC GCAGGTGTTA
GCCAACGGCT ACCTCATCCC GGGGGAGGAT CCCGGCCCGC CACTGTCGGT TGTGGCGTCG
CCGGCGCAGT TTGACGGGCG GCCACTCACC GCGGTGCGGC GGGCGCCCGA GCACGGCCAG
CACACGGAGG AGATCCTCCT GGCATCTGGC TATTCGTGGG ACGACATCAC CGCCCTCAAG
GAGCAGGGCG CCATCATCTG A
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| Protein sequence | MPDQLRYDLL AGVKVVEVAA WLFAPSCGAI LADWGADVIK IEPTRNGGDP YRGFFHTGAV
NPTIELANRG KRSAAVDLST PAGHDVLLQL VADADVFVTN LLPDPRGRLG VEIADIRGAN
PSIIYVRASG YGPRGSDAET PGFDAAVAWA RVGVAQFLTP PDARQPIHPP GGIGDCVGGL
GGAGAVAAAL FKRERTGVPS EIDVSLLASG MWMNATVLMT EANAGPEGSL MQRVDRRTVR
NPLSNSYQTK DGRWLSMVVI QPDPHWRSFC EHIGRPELAD DPRFVDFHAR MTNNTELVGL
LDEVFASRAM AEWREALRTF SGVWDVLQTP AEVVHDPQVL ANGYLIPGED PGPPLSVVAS
PAQFDGRPLT AVRRAPEHGQ HTEEILLASG YSWDDITALK EQGAII
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