Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4653 |
Symbol | |
ID | 5672996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 5552932 |
End bp | 5553480 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641243511 |
Product | integrase catalytic region |
Protein accession | YP_001508927 |
Protein GI | 158316419 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGCAG TGGACTTTTT CCACGTGGAT TGCGCGGTGA CGCTGCGGCG TCTGTACTGC TTCTTCGTCA TAGAGGTCGG CTCCCGCTCC GTCCACATCC TCGGGGTCAC CGCCCACCCG GACGGGCTGT GGACCACCCA ACAGATCCGC AACCTCCTCA TGGACCTCGG CGACCGGGCT GCCGACTTCC AGTTCCTGAT CCGCGACCGG GCCGGCCAGT TCACCGCGTC GTTCGACGCG GTCCTCGCCG ACGCCGGCAT CACCGCCGTC ACGATCCCAC CCCGGGCTCC GCGGGCGAAC GCCTACGCGG AACGGTTCGT CCACACGGTC CGGACCGAGG TCACCGACCG CATGCTGATC TTCAGTGAAC GGCACCTGCG CACCGTCCTG GCCGAGTACG CCGCCCACTA CAACGGACGA CGGCCCCACC GCGGCCGCGA CCTTCAACCG CCCCGGCCCG ACCACCCCGT CGCCGACCTG AGCCAGGAAC GGATCAGGCG CCAGCCCGTC CTCGGCGGCC TGATCAACGA ATACGAACGA GCAGCCTAA
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Protein sequence | MLAVDFFHVD CAVTLRRLYC FFVIEVGSRS VHILGVTAHP DGLWTTQQIR NLLMDLGDRA ADFQFLIRDR AGQFTASFDA VLADAGITAV TIPPRAPRAN AYAERFVHTV RTEVTDRMLI FSERHLRTVL AEYAAHYNGR RPHRGRDLQP PRPDHPVADL SQERIRRQPV LGGLINEYER AA
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