| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4594 |
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| Symbol | |
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| ID | 5672939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5476099 |
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| End bp | 5477019 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641243455 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001508871 |
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| Protein GI | 158316363 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.90193 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCTGA TCGGCACCAG TCGAAAATCC TTAGCCGTGA TCACCGGCGC CTACGGCGGA
ACAGGCCGCG CCGTGGCCCG GCGCCTCGGC GTGCGCTACC GGCTCGTCCT CTCCGGCCGC
AACGAGGTCG CGCTGGCCGC GCTGCACGAC AGCCTCACAG AAGAGGGCTA CGACATCGCC
CTCTCCGTCG CCACCGACGT GGCGAGCTCG GACAGCGTCC AGCGGCTCGC CGCGGCGGTG
AGCGAGGCCG GCACCCTGGG CACGCTGGTC CACACGGCCG GCCTCTCCCC CGCCCTCGCC
GGCCCGCGGA CGATCGTGGA GGTCAACCTC CGCGGGACGG CGCACCTGCT CGACGCGTTC
CTGCCGCTGG CCGTCCCCGG CAGCTCGGCG GTCTGCATCG GCTCGGTGGC GGCCCACACC
TTCAGCTCAT CGGCCGAGGT CGACGCCGTG CTCGACGACC CGCACTCCGG CCGCCTCGCC
GTCGACCTGG AGCGGCTCCT GCTCGCCGCC GACCCGAACC CGACTCCCTA TTTCTTCGCT
GTACGCGCCT ACGGGGCGTC GAAGCGCGGC GTCCTGCGGC TGGTGGAACG GTCGGCCGGT
GCCTGGGCCG AGCGCGGTGC CCGCATCCTG TCGGTCTCGC CGGGCACCGT GCTGACCCCG
ATGGGCCGCC AGGAGATGGC GGCGAACCCG CTGGCCGCCG CGGCCGCGGA GGTGACCCCG
CTACGGCGGC TCGGAATGCC CGCCGACATT GCGGCGGCGA TCGACTTCCT CGTCTCCGAC
AGCGCCAGCT ACATCACCGG GTGCGACCTG CGCGTCGACG GCGGCATCGT CGCCGCCAGG
CGTCATCCGG CCGACGCTCC CCGTCCCGCC AGCCCGCCGA CTCCCGTGAG CGAGCCTCAT
GTCACCCTCG ATCCAGCCTG A
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| Protein sequence | MNLIGTSRKS LAVITGAYGG TGRAVARRLG VRYRLVLSGR NEVALAALHD SLTEEGYDIA
LSVATDVASS DSVQRLAAAV SEAGTLGTLV HTAGLSPALA GPRTIVEVNL RGTAHLLDAF
LPLAVPGSSA VCIGSVAAHT FSSSAEVDAV LDDPHSGRLA VDLERLLLAA DPNPTPYFFA
VRAYGASKRG VLRLVERSAG AWAERGARIL SVSPGTVLTP MGRQEMAANP LAAAAAEVTP
LRRLGMPADI AAAIDFLVSD SASYITGCDL RVDGGIVAAR RHPADAPRPA SPPTPVSEPH
VTLDPA
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