Gene Franean1_4569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4569 
Symbol 
ID5672916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5451949 
End bp5452782 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content72% 
IMG OID641243432 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001508848 
Protein GI158316340 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.572506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.593362 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGACG ATGTCATGGG GAGCACGCCC CGCCCGCCCG ACGGTGACTG GCTCGGCACG 
CCGTACCTGA GACTTGAGCG GCACGAGCCG TTCGGGCACC TGGTCGTCGA CCGGCCCGAG
GCCCGCAACG CGCTCACTCC CGCGATGTAC TTCGGCGTGC GCTACGCCGT CCGGCGGGTC
GACGCGGACC CGGCCCTCGC CGGCCTGCTG ATCACCGGGG TCGGCGACGT GTTCATCCCC
GGCGGCGATC TGGGCAAGAA CGCCGGCGAC CACTGGCTGC ACCTCGGCGG GGTTCCCGGG
GCCATCGACG TACTTCCCTT CGATGTCCTG CGGCAGAGCG TCAAGCCGGT GGTGGCGGCG
GTGAACGGGA TCTGCCAGGG CGGCGGCCTC ATCATCGCGC TGTGCTCGGA CATCGCGGTG
GTGAGCGAGC GGGCGACCTT CCGGGTGCCG GAGCTGCTCC GCGGGATCTC GGACACCTAC
TTCGCCTCGA TGCTGGCACG CCTCGTCGGG CCGGTGCGCA CGCGCGACCT GATGCTCACC
GGTCGCACCC TCACAGCCCA GGAGGCGGTC GAATGGGGCC TGGTGAGTCG GGTCGTCCCC
CATGACGAAC TCCTCGACGC GGCCGCTGCG GTGCTCGCCC AGTGCTGCCA GACCGCCCCC
GGCGCCCGCC GCGATGTCAA GCGCGTGCTG GACCAGTACG GCGGGCTGCA CGACCGCATC
GCGTTCTTCG ACAGCCTGCA CCGGGACGAG TCGCGCGAGG GCTTCTCCGC CTTCATCGAG
AAGCGTTCGC CCAACTGGGT ACCCGAGGCG CTGCGCCGCG ACGCCCGCGC CTGA
 
Protein sequence
MDDDVMGSTP RPPDGDWLGT PYLRLERHEP FGHLVVDRPE ARNALTPAMY FGVRYAVRRV 
DADPALAGLL ITGVGDVFIP GGDLGKNAGD HWLHLGGVPG AIDVLPFDVL RQSVKPVVAA
VNGICQGGGL IIALCSDIAV VSERATFRVP ELLRGISDTY FASMLARLVG PVRTRDLMLT
GRTLTAQEAV EWGLVSRVVP HDELLDAAAA VLAQCCQTAP GARRDVKRVL DQYGGLHDRI
AFFDSLHRDE SREGFSAFIE KRSPNWVPEA LRRDARA