Gene Franean1_4546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4546 
Symbol 
ID5672895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5423009 
End bp5423350 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content69% 
IMG OID641243411 
Productputative lysyl tRNA synthetase-like protein 
Protein accessionYP_001508827 
Protein GI158316319 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.497826 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAGA AGACCATCGT TTCGCTGATC GACGACCTCA GCGGAGAGAC GGCCGAGGAG 
ACCGTCCGGT TCGGGCTGGA CGGCGCACAC TACGAGATCG ACCTGTCAGA GACGAACGCC
ACAAAACTGC GGGAGTCACT GGCCTCGTTC GTTACGGCGG CCCGCCGTTC CGGTGGCCGC
GCCGGCAGCG GACGGCGCGG CCCGCGCGCC GCCTCGCCGC GTTCCGCGGG AACCGACCGC
ACCGCCGACA TCCGCGAGTG GGCGCGCAGC AACGGCTACA CGGTGAGCGA CCGGGGTCGT
ATCGCGTCGA ACATCGTCGA GGCTTTCGAC AAGGCTCACT GA
 
Protein sequence
MAQKTIVSLI DDLSGETAEE TVRFGLDGAH YEIDLSETNA TKLRESLASF VTAARRSGGR 
AGSGRRGPRA ASPRSAGTDR TADIREWARS NGYTVSDRGR IASNIVEAFD KAH