Gene Franean1_4490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4490 
Symbol 
ID5672840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5357224 
End bp5357619 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content69% 
IMG OID641243357 
Productethyl tert-butyl ether degradation EthD 
Protein accessionYP_001508773 
Protein GI158316265 
COG category 
COG ID 
TIGRFAM ID[TIGR02118] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTACCAGG TCATGATGCT GAGCAAGCGG CGGCCCGGCT TATCCATGGC CGAGTTCGTC 
GAGAAGTACG AAACGCGGCA TGCGCCCTAC GCGGCGGAGC AGATGCCGAC CGCCCGGCGC
TATGTGCGGC GGTACTTCGG ACCGCTCAGC ACCGCCGACC AGCCCGACGA TGAGCGGGAG
TTCGACGTCG CGACCGAGAT CTGGTTCGAC GACCGTGCCG CCTACGAGCG GGCGATGGAG
CGGTTCGCCG ATCCGGTGGT CGCCGCCCGG CTCGCGCAGG ACGCGCAGGA GCTGTTCGAT
CCCGGCCGCA GCACGCTACG CGTCCATGTC GAAGAACAGG CGAGTCAGCC CGGCGGTGGC
GATGGTCCGG TGGGCGCCGA CCAGGGGAGC TTCTGA
 
Protein sequence
MYQVMMLSKR RPGLSMAEFV EKYETRHAPY AAEQMPTARR YVRRYFGPLS TADQPDDERE 
FDVATEIWFD DRAAYERAME RFADPVVAAR LAQDAQELFD PGRSTLRVHV EEQASQPGGG
DGPVGADQGS F